Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0718 |
Symbol | |
ID | 5732633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 825693 |
End bp | 827573 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641277848 |
Product | ABC transporter related |
Protein accession | YP_001543494 |
Protein GI | 159897247 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.332523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTA TCAATTTAGA AACTATTTCC AAAGCCTATG GCCCTAAAGT GTTGTTTGAA AATATTTCCT TGGGCTTAGC AAGCGGCGAT CGAATTGGCT TAATCGGGGT CAATGGCAGT GGTAAATCGA CCTTATTAAA AATTGCTGCT GGTTTAGAAC AACCAGATAC TGGCCGCGTA ACTTTGCGTA AAGATTGTCG CATTGGCTAT TTGGCTCAAG ATCCGCCGAT GGATGCTAAC CAAACGGTGT TGGAATATGT GTATGCGGCG GCAGGCGAAG GCGCAACCTT ACTTAGCCAA TATACGCTCG CTAGCGTGCA GCTTGAGCAA GACCCGAACG ATGCTAAAAC GCTGGCCGCT GTTGCCGAAT TGAGCGAACG GCTGACCACG CTTGATGCTT GGGATACTGA GTTGAGCGCT CGCACGGTGC TTTCGCGACT TGGCATTACC ACTCTTGATG CCCAACTTGG CACGCTCTCT GGCGGCCAAC GCAAGCGCGT GGCGATGGCG CGGGTGCTGA TCGAAAAGCC CGATTTGCTG ATTCTCGATG AGCCAACCAA CCATATCGAC CCAACCACCG TAGCTTGGCT GGAGGGTTAT TTAGCCAATT TACAAGGCGC GTTACTGTTG ATCACCCACG ATCGCTACTT TTTGGATCGG GTGGTGACGG CGATTGTTGA GCTTGAAGAT CATCAACTCT TCTCCTACCC TGGTAATTAC GAGCGCTTTG TGGTCGAGCG GATTGAGCGC GAACGCCAAC GTGCCAAGGC CGAGCTTGAC CATCGCAACG AGGTGCGCCG CGAATTGGCT TGGTTGCGTC AAGGTGCGCA AGCCCGAACC ACCAAACAAC AAGCCCGCGT CGATCGCGCC AATGCCTTGA TCAACCAAGA GCGTCGTCAA GAACGTGGCA CGTTAGATCT TGAATCGACA GGCCGACGGA TTGGCAAAAA GCTGATCGAA ATGCATGGCC TGAATAAGCA AATTGCTGGC AAAACCTTGT TGAGCAATTT TGAATATCAG CTTACTCGCG ACGATCGGCT GGGAATTATC GGCCCCAACG GGGTTGGTAA ATCGACCTTG CTCAATTTGA TCGCAGGCCG TTTACAACCC GATAGTGGCG AATTAGTGGT TGGCGAAACT ATCCACGTGG CCTATTACGA TCAAAGTAGC AGCGATCTTA ACCCCAACCA ACGCTTGATC GATTATGTCA GTGATGGCGC TGAGTTGGTG CAAACAGGCG AGGGTTTGCG CACCGCCAGC CAAATGCTTG AGCGCTTTTT GTTCCCCAAT AATCAGCACT GGGATTATAT CCACAGCTTA TCGGGGGGCG AACGCCGCCG CCTTTATTTA TTGCGAACCC TGATGCGCAA TCCCAATGTG TTGCTGCTCG ACGAACCCAG CAACGATCTT GATGTGCAAA CCATTGCGAT TCTGGAAGAA TACATTGAGC AATTTAATGG CGCAGTGATT ATCGTCTCGC ACGATCGGGC TTTTCTCGAT AACACGGTTG ATCATTTGCT GATTTTCGAG GGCGATGGCA AGGTTCGTCA CTTTCCAGGC GATTACTCGG CCTATCGTGA AGTCTACGAA CGTGAGCAAG CAACCCTCAA GGCTGTAACC AAACCGTCAA CTCAAGAGCG GCCACGCGAG CAAAAACCGC GTAAACTGAG CTTCAAAGAG CAACGCGAAT TAAGCGAACT CGAAAAAACT ATCGCCAACT TGGAAGCCCG CCAAAACGAA TTGAATGCAG CATTGAATAA CGCAGGTAGC GATTATCAAG CCTATACCCG GTTGCACACC GAACTTGAGC AGGTCAGCCA AACCCTAGAA CAAAGCTACG AACGCTGGAT GGAACTTTCT GAGCTAGCGT CGGCTTCGTA A
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Protein sequence | MNIINLETIS KAYGPKVLFE NISLGLASGD RIGLIGVNGS GKSTLLKIAA GLEQPDTGRV TLRKDCRIGY LAQDPPMDAN QTVLEYVYAA AGEGATLLSQ YTLASVQLEQ DPNDAKTLAA VAELSERLTT LDAWDTELSA RTVLSRLGIT TLDAQLGTLS GGQRKRVAMA RVLIEKPDLL ILDEPTNHID PTTVAWLEGY LANLQGALLL ITHDRYFLDR VVTAIVELED HQLFSYPGNY ERFVVERIER ERQRAKAELD HRNEVRRELA WLRQGAQART TKQQARVDRA NALINQERRQ ERGTLDLEST GRRIGKKLIE MHGLNKQIAG KTLLSNFEYQ LTRDDRLGII GPNGVGKSTL LNLIAGRLQP DSGELVVGET IHVAYYDQSS SDLNPNQRLI DYVSDGAELV QTGEGLRTAS QMLERFLFPN NQHWDYIHSL SGGERRRLYL LRTLMRNPNV LLLDEPSNDL DVQTIAILEE YIEQFNGAVI IVSHDRAFLD NTVDHLLIFE GDGKVRHFPG DYSAYREVYE REQATLKAVT KPSTQERPRE QKPRKLSFKE QRELSELEKT IANLEARQNE LNAALNNAGS DYQAYTRLHT ELEQVSQTLE QSYERWMELS ELASAS
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