Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0684 |
Symbol | |
ID | 5732585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 786605 |
End bp | 788401 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641277814 |
Product | ABC transporter related |
Protein accession | YP_001543460 |
Protein GI | 159897213 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000210902 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCAC AAGCACCGAA ACAGTTGGGA AATTTGCGCC ATTTAGAATT GCGGCGCATG TTTCAATATG TCTATCCCTA TCGTTGGCGA TTAAGCTTGG CGCTGTTGTG TTTGGCGATT TCAAGTGGCA TTGGCCTAGT TATGCCATTG GCGATTCGCA ATTTGGTCGA AACGGTCAAA GATGCTTCAA GCACCGCCGC CTTAGATAAA GTGGCGATCG GCTTGATGGG CGTATTCATC GCGCAAATGG TGTTTAACTA TATTCAAGGC TATTTTTTGA CCTACGTTGG TGAACGAGCA GTCGCCGACC TGCGAATTGA GGTTTATTCG CATTTACAAC GGCTATCATT GGCCTTTTTC AGCGAACGCC GCGTCGGCGA ATTGACTTCA CGAGTCACCA ACGATGTCAC GGTGATTCAG GGTATCGGTA CAAATGCGGT TGCCGCGTTT CTACAAAATG GCATTACCTT TATCGGTAGT TTCATTATGA TGATTAATCT CAGTTGGCAA TTGACTGCGA TTACCCTATT GCTGATTCCC CTGTTGATTG TACTGGCGAT CATCTATGGC CGCCGAATTC GCAATATGTC CACCGAAGTC CAAGATCGCA TGGCTGAAGC TTCATCGGTG CTGGAAGAAA CCATCTCGGG CGTGCGCATC GTCCAATCAT TTGCCCGTGA ACCATACGAA GTTGAGCGAT TTAGCGGAGC GATTGAGCAT GCTTTTTCGG CCTCGATGCG CCGCACCAAA ACCCGTGCTC AGTTTGTGCC AATTGTCTCG TTTTCGGGCT TTGGCGCGTT GGTGTTCGTG CTTTGGTTTG GCGGTCGCCA AGTATTAAAT GGCACAATGC AACTTGGCGA TTTAATCGCC TTCTTGTTGT ATGCCGCCGT GATTGCTGGC TCGTTGGGCA CGTTTACCAG TTTATATAGC CAATTGCAAG AAGCACTTGG TTCGACTGCC CGCGTATTCG GCATTTTGGA TACTGCTCCC GAAATCGCCA GCAAAACCAA TGCAATCAAC TTACCGCCAA TTGAAGGCGA AATTTATTTA GAGGATGTAT CATTTAACTA TGGCGAGGCT GCAACTCCAG TTTTGAGCAA CATCAATCTC AAAGTTGAGC CAGGCGAAGT CATGGCGATT GTCGGGCCGA GTGGTTCAGG CAAATCAACC TTGGTTAATC TTATTCCGCG TTTTTACGAT GTAACAGCGG GGCGGATTAC GGTTGATGGT TTTGATATTC GCGATGTCGA TTTGCCCTCG TTACGTTCAC AAATTGGAAT TGTGCCGCAA GAAACGTTAT TATTTAGTGG TACGATTGCC GATAATATTC GTTATGGCAA CCTTGATGCG CCGATGGAAG CGGTGATTGA AGCCGCCAAA GCTGCCAACG CTCACGAATT TATCAGCAAT TTCGAGGGTG GCTATGAATC GATCGTTGGG GAGCGCGGGA TTAAACTATC TGGTGGGCAA CGCCAGCGGG TTGCAATTGC CCGAGCTTTG CTCAAAAACC CACGTATTTT AATTCTCGAT GAAGCAACAT CGGCAATGGA TAGCGAATCG GAAGGTTTGG TGCAAGAAGC CTTAGAACGC TTGATGCAAG GTCGCACCAC GTTTGTAATT GCCCATCGGC TTTCAACGGT CAAAAATGCT ACACGAATTG CCGTGATTGA AGCCGGCAAA GTGACCGAAC TTGGTAGTCA TAGCGAACTT TTGGCTCAAG CGGGCACATA CGCTCGTTTG TATCAATTGC AATTTGAAAC CAACGAAAGT GCCGGATCTG TGCTAACAGA GTATTAA
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Protein sequence | MLAQAPKQLG NLRHLELRRM FQYVYPYRWR LSLALLCLAI SSGIGLVMPL AIRNLVETVK DASSTAALDK VAIGLMGVFI AQMVFNYIQG YFLTYVGERA VADLRIEVYS HLQRLSLAFF SERRVGELTS RVTNDVTVIQ GIGTNAVAAF LQNGITFIGS FIMMINLSWQ LTAITLLLIP LLIVLAIIYG RRIRNMSTEV QDRMAEASSV LEETISGVRI VQSFAREPYE VERFSGAIEH AFSASMRRTK TRAQFVPIVS FSGFGALVFV LWFGGRQVLN GTMQLGDLIA FLLYAAVIAG SLGTFTSLYS QLQEALGSTA RVFGILDTAP EIASKTNAIN LPPIEGEIYL EDVSFNYGEA ATPVLSNINL KVEPGEVMAI VGPSGSGKST LVNLIPRFYD VTAGRITVDG FDIRDVDLPS LRSQIGIVPQ ETLLFSGTIA DNIRYGNLDA PMEAVIEAAK AANAHEFISN FEGGYESIVG ERGIKLSGGQ RQRVAIARAL LKNPRILILD EATSAMDSES EGLVQEALER LMQGRTTFVI AHRLSTVKNA TRIAVIEAGK VTELGSHSEL LAQAGTYARL YQLQFETNES AGSVLTEY
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