Gene Haur_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0680 
Symbol 
ID5732581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp780364 
End bp781281 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content54% 
IMG OID641277810 
Producthypothetical protein 
Protein accessionYP_001543456 
Protein GI159897209 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAGG CTGTTGGTGA TTCATCGATT TCTTCGCCAC CCCACCATGT CGATCCATCA 
ACAAGCCGTC AGCGCTGGCT TGGGATTGCG GCTATGCTGC TTTCGGCGAT CGCCTTTGGC
TGGCTGGGTG TGTTTGCGCG GTTGGCCTAC GCCGATGGTG CTGAGCCGAT CACGGTGTTA
TGTTTACGAT TCAGTATTGC CGCCGTGGTC ATGTTTGGTA TTTTGCGCGT TCGTGGTGAA
CGGCTGCCAC GTGGAAAGCT GCTGATCGGC TTGATCCTCC TAGGCGGGAT TGGCTATGTG
GCTCAATCGT TGGCCTATTT TGTTGCGCTT ACCATGGCCT CGGCGGGCTT AGTTGCTGTG
TTGCTCTATC TCTATCCTGG CTTGGTTACC ATAATATCGG TTGTGTTTTT TAAGGAACGA
CTGACCCCTC GGATAATGCT GGCGCTGGTG TTGGCACTGG CAGGCTCAGC GTTGGCAATT
GGCCCAATTG GTGGTGGCAA ACCGCTCGGC ATCATTTTCG CCATCAGCGG GGCGGTGATC
TACGCTATTT ACATTACGGC GGGTAGCCGA GTTACCGCGC AGGCCGGAGC GATTCCTTCA
TCGACGGTGA TTATGAGTGC GGCAGCGGTG GTGTATCTTG GAATTGTGCT TGCCCGTGGC
CCGGTCTGGC CAGCAAGTAT AGATGGCTGG CTAGCAATTA TTGGCATTGC GCTGATTTCT
ACCGTGCTGG CGATTGTGAT GTTTTTTATT GGACTTGAAC GGATTGGCCC AACTGCTGGC
TCAACGATCT CAGCATTGGA ACCCTTGGTA TCGGTAGGAG CAGCAGTCGT CGTCTTACAT
GAACCAATTA GCCTCTGGCA ACTTGGCGGT GGCCTGCTGA TCCTCGCGGC AGTCGTTTTG
CTAGCACGCA ATGCGTGA
 
Protein sequence
MKQAVGDSSI SSPPHHVDPS TSRQRWLGIA AMLLSAIAFG WLGVFARLAY ADGAEPITVL 
CLRFSIAAVV MFGILRVRGE RLPRGKLLIG LILLGGIGYV AQSLAYFVAL TMASAGLVAV
LLYLYPGLVT IISVVFFKER LTPRIMLALV LALAGSALAI GPIGGGKPLG IIFAISGAVI
YAIYITAGSR VTAQAGAIPS STVIMSAAAV VYLGIVLARG PVWPASIDGW LAIIGIALIS
TVLAIVMFFI GLERIGPTAG STISALEPLV SVGAAVVVLH EPISLWQLGG GLLILAAVVL
LARNA