Gene Haur_0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0606 
Symbol 
ID5732504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp696810 
End bp699167 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content47% 
IMG OID641277733 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001543382 
Protein GI159897135 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTGGC AAATTCCATC GTATACCTTT CCCACCTTGA TTGCGAGCAG CGTTTCGTTT 
GCAATCGCAA TTATTGTCTC ACGTCGCCGC TTTGTTTCAC AGATGTGGCC GTTTGCTATT
TTAGCTTTCA CTGTTGCTTT TTGGACATTG GGCTATGCAT GGGAATTGGT CAGTGTTGAT
TTAGCGACTA AAGTTATTTT TGCTAAAACT CAATATTTAG GCATTGCTAC GCCACCAGTC
GCTTGGGTGG CGTATGCTTT ATATTACACC GGACAAGAGC GTTTTGTCAC TAAGCGTAGT
TTTTTATATG CCATGATTAT TCCTGCAATT ACCATTGTTT TAGTCTGGAC GAATGAATGG
CATCATTTGA TTTGGACAAA AACTGAAATT GCGATGTATG GCGAATATAC GATGCTCCAA
ACTTATTATG GACCATGGTT TTGGGTGCAT ACGGCTTATT CATATGTGTT TATGGCGGCT
GGTACGTTAA TTTTGCTGCA AGCATTAGTA CTTTCTTCAT CGCTTTATCA AAATCAAATT
ATTGCCTTAA TTTTAAGTGC AATCGCGCCA TGGGTCACCA ATGCGTTTCA TATTTTAGGC
TATCGGCCAT TTCCCTATCT TGATTTAACC CCGTTTGGCT TTGTGATTAG CACCGTTGCC
TTGGCGTGGG GGGCTTTGCG CTATCGTTTG TTCGATACGA TTCCAATTGC GCGGCATATT
TTGATGGAAA ATCTCAGTGA GGGCGTGATT TTTCTCGATG CTAAGCGCCG CGTGATGGAT
ATGAACGCCA CGGCTGGCAA GTTGTTGGAT ATTCGGCCCG ACCAGCAAAT TGGTCAATCG
GCCATCGTCA GCATTTTAGA ACGTTTGGAT GCACCGCAAT CGGATGATTC TGATGAGCAT
TTGCGTTGGG AATATACGCT CCATCGCGAT GAGAAAAAAT TAGTGCTCGA TGTGCAATTA
TCGCCACTGA GCGATCGCAA TCGCTATCTT GGCCATTTGC TGTTGCTACG CGATATTACT
GAGCGCCATC AGTACGAAGA TTTGCTGCGC TCGCAACGTA ATTTGTTTGC CGGCTTGGTT
GAAGTGGCCC GCGCCACCAG CGCTCAGATT GATCTCGACC AGACCTTGCA AAGCACCTTG
GATGTGGCGC TCCACCTAAC CACAGCCGAG CAAGGCAGTA TTTTTCTGCT CGACCAACAT
CAAATGGTGA CTCATAGCAT TTTGGCCCGC GAAAAAGCCA CGCGCATCGA ACAGCAAAAT
TTGGTTGGGC GGGTGATGCG CCAAGGCTTG GCAGGCTGGA TCGTCGCCCA CAATCAAATT
GCCTTGATCA AAGACACCCA CACTGATGAT CGTTGGTTGC ATTTGCCAAA CGCACCCTAC
AATGCGCGTT CGGTGTTGGC CTTGCCGATT TTTGGCACGG CTGGAATTTT GGGTATTTTG
ATGCTGTTGC ATTCAGAGGT TGATCATTTT CGCCAGGAGC ATTCCGAGTT GATGGAAGCG
GCTACCGCTC AAATTTCGTT TGCAATTGGC AACGCCCATG TGTACCAAAC CCAGCAACAA
CTGACTCGCG AGCTAAGCCG CGCCAAGGAT GCTGCCGAGG CTGCTAGCCA AACCAAAAGC
CAATTTTTGG CCAATATGAG CCACGAATTA CGCACCCCGC TTACCGCGAT TATTGGCTAT
GCCGATGTGA TGCGCGAAGA TTTACTCGAT TCCAACGACC AAATTTATTT AGCCGACTTG
GATCGGATTC GCTCAGCCGG AGCGCATTTG TTGGGCTTAA TCAACGATGT GCTTGATCTC
TCGAAAATTG AGGCAGGCAA AATGCCAGTC TATTGGGAGC AAACCCGCGT CAGCATTCTA
TTAAATGATG TGATTACGAC GGTGCGCCCA CAGATTGACC GCAACCATAA TAGCCTGATG
ATCGACCAGA CCTACCATAA CCTGATGTTT TGGACCGATA TTTCTAAGTT GCGGCGGGTG
TTGATTAATT TGTTGGGCAA TGCGGCCAAA TTCACTGACC ATGGCACGAT TTCGCTCTCG
CTTTTTCTTG ATGAAACCGA TGAGCCTGCT TGTTTGCAAA TACGGGTTTG CGATACAGGC
ATTGGGATGA CGGCTGAGCA AGTTGCCAAT TTGTTTCAAA ATTTTAGCCA AGCCGATGCC
TCAACAACGC GTAAATATGG CGGCACTGGG CTTGGCTTGG CGATTAGTCG TAATCTGTGC
AAATTAATGG GCGGCGATAT TGAAGTGACC AGCGAGTTAG GCCATGGCTC AACTTTTATT
GTCAAGTTGC CATGGGTCGA GCAACCATTT AGCGATCAGC GTGAAGTTGG TTCCGACGGA
CCACCCTACC TGTTTTGA
 
Protein sequence
MHWQIPSYTF PTLIASSVSF AIAIIVSRRR FVSQMWPFAI LAFTVAFWTL GYAWELVSVD 
LATKVIFAKT QYLGIATPPV AWVAYALYYT GQERFVTKRS FLYAMIIPAI TIVLVWTNEW
HHLIWTKTEI AMYGEYTMLQ TYYGPWFWVH TAYSYVFMAA GTLILLQALV LSSSLYQNQI
IALILSAIAP WVTNAFHILG YRPFPYLDLT PFGFVISTVA LAWGALRYRL FDTIPIARHI
LMENLSEGVI FLDAKRRVMD MNATAGKLLD IRPDQQIGQS AIVSILERLD APQSDDSDEH
LRWEYTLHRD EKKLVLDVQL SPLSDRNRYL GHLLLLRDIT ERHQYEDLLR SQRNLFAGLV
EVARATSAQI DLDQTLQSTL DVALHLTTAE QGSIFLLDQH QMVTHSILAR EKATRIEQQN
LVGRVMRQGL AGWIVAHNQI ALIKDTHTDD RWLHLPNAPY NARSVLALPI FGTAGILGIL
MLLHSEVDHF RQEHSELMEA ATAQISFAIG NAHVYQTQQQ LTRELSRAKD AAEAASQTKS
QFLANMSHEL RTPLTAIIGY ADVMREDLLD SNDQIYLADL DRIRSAGAHL LGLINDVLDL
SKIEAGKMPV YWEQTRVSIL LNDVITTVRP QIDRNHNSLM IDQTYHNLMF WTDISKLRRV
LINLLGNAAK FTDHGTISLS LFLDETDEPA CLQIRVCDTG IGMTAEQVAN LFQNFSQADA
STTRKYGGTG LGLAISRNLC KLMGGDIEVT SELGHGSTFI VKLPWVEQPF SDQREVGSDG
PPYLF