| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0545 |
|---|
| Symbol | |
|---|
| ID | 5732403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 633661 |
|---|
| End bp | 635367 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641277672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543321 |
|---|
| Protein GI | 159897074 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1479] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAATA CCTATATCGA AAGCGAGACA GCGCCTATTG GGGATTTTAT CAACAAGGTT
GAAGCTTTAA AAGTACCAGT CTTTCAACGA AGTTTTGCTT GGACGGAAGA TGAGATTAAG
CTGTTATGGG ATGATATTAC AGCAATTATT GAATTACCTC AGCCAGAGTA CTTTCTAGGA
TCAATGGTTT TCAAGAAGAA GGATGGTTAT TATGAGATAA TTGATGGTCA GCAAAGAATT
ACTGCTATAT ATATTATATT AAGCTGTATA AGAAATATTT ATCGAATAAA TAGTGATACC
CAACGAAACG AATGGTTTAA TAGGGAATAT TTTGGAAAAA TAGATATAAA TACATTAACT
ATAAACTCTA AATTTCAAAT GAATGAAATT AATAATCCTT TTTTTCAAAA ATACATTGTT
TCTGAATCAA ATATTGAAGA AATAGAAGAA AACATCAAAA ATCTCCCTAA GAAAGATACG
AATCATCTTC TTGGAAAAGC AATCAAACAG ATTTATAGTT TGCTGATCGA GAGGCAAAAG
GAATTTTCTG GTACAGAATT TAGTTCAGAT GCGCTCCTAT CTATACATAA TATTATACAA
AAACATATAT ATGTATTAAT ATTAAAGGTA TCAGATGAAG CGGATGCCTA TACTATTTTC
GAAACACTCA ATGATCGAGG GCTGGGATTA ACAACTATGG AACTGTTAAA AAATCATATA
TTTGAAAAAT CAGGTATGTA TCTTCCTTCA GTACAAAATG AATGGTCTAT TTTACGCGAT
AATCTTCTTC ATAGCGATCC GAGTGATCGA TTTATCCACC ATTATTGGAC ATCGATCCAT
GGACGAACAT CAAAACCACA ATTATTTAGA TTGATGAGAA AACAAGTAAA TACTCCCATC
CAAGCGGTAG AATTCGCACG AAGTTTGAGG ACATCGGCCA GATTATATGC GGCGTTTGGA
AATCCAAATG ATGATTATTG GAATGACCAT GAAAAACAAA CTAGAGATAA CTTAGAAGTA
CTTGATATTC TTGATGCACA GCAGGTTATG CCAGTTTTAT TAGCAGCAGT ACAAAAATTT
AATCCAACTG AGTTTAGGAA ATTAACCTAT GCTTTGGTCG TTATGGCAGT ACGATATAAT
TTAATTGGAG AATTACGGAC AGGTGTTATT TCAAACTACT ATTCTGATAT TCCGAAAAAG
ATCCATTCTG GTGAGCTAAA TAAAAGTATA AAAGTATGCA GAGAATTCAG ATCGATATAT
CCTACAGACG AAGAGTTTGA GGAGGCGTTC AGTACTAAGG TTCTAAGTGA TGCAAAGAAA
TCACGTTATT TACTTATAGA GTTAGAAAAA AATTTTAACG GAGGAAGCTC ACAGGTTTCT
AATGATCCGA GAAAGGTTAA TTTGGAGCAT ATTTTACCAC AGAATCCATC AAATGAATGG
ATTGATACAA TAACACAGGC AGGTGACGAT TTACGGAAAT ATATCTATAA ACTTGGTAAC
CAAGCGCTCG TTTCAACAAC GCCAAATAAG AAATCAGGAG CAAAAGGATT TATTTACAAA
AATACTAATC TCTATAGCAA GGAAACACAA ATTTATTACA CTCATATGCT TACACAATAT
AGCACATGGC TTCCTGCAGA TATTATTAGA CGCCAAAAAG AACTGGCAAA GCAAGCCGTA
AAAACATGGA GGATAGAATT CTCCTAA
|
|---|
| Protein sequence | MGNTYIESET APIGDFINKV EALKVPVFQR SFAWTEDEIK LLWDDITAII ELPQPEYFLG
SMVFKKKDGY YEIIDGQQRI TAIYIILSCI RNIYRINSDT QRNEWFNREY FGKIDINTLT
INSKFQMNEI NNPFFQKYIV SESNIEEIEE NIKNLPKKDT NHLLGKAIKQ IYSLLIERQK
EFSGTEFSSD ALLSIHNIIQ KHIYVLILKV SDEADAYTIF ETLNDRGLGL TTMELLKNHI
FEKSGMYLPS VQNEWSILRD NLLHSDPSDR FIHHYWTSIH GRTSKPQLFR LMRKQVNTPI
QAVEFARSLR TSARLYAAFG NPNDDYWNDH EKQTRDNLEV LDILDAQQVM PVLLAAVQKF
NPTEFRKLTY ALVVMAVRYN LIGELRTGVI SNYYSDIPKK IHSGELNKSI KVCREFRSIY
PTDEEFEEAF STKVLSDAKK SRYLLIELEK NFNGGSSQVS NDPRKVNLEH ILPQNPSNEW
IDTITQAGDD LRKYIYKLGN QALVSTTPNK KSGAKGFIYK NTNLYSKETQ IYYTHMLTQY
STWLPADIIR RQKELAKQAV KTWRIEFS
|
|---|
| |