| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0491 |
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| Symbol | |
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| ID | 5732405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 572792 |
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| End bp | 574024 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641277617 |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_001543270 |
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| Protein GI | 159897023 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0215963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTCC TACGTCGAGT CCCACTATTT GCCGATCTTT CGCTCGAAGG CTTGCAAATG
CTCGATAGTC AGGCGCGAAT TCGTGCGTTG CCAGCCGATG CCTGGTTGTT TCACCAGCGT
GATCGTGGCG ATGCTTGTTA TGTGGTAGTC AGCGGAACCT TGCGGCTGGT GCTTGAGCAA
GGTAGTTCTG AGGAAACGAC CCTTGGGTTG TTGGGGGTTG GGGCATTTTT TGGCGAGCTA
AGTTTATTGG AGCCTGATGG AACCCGCGCC GCTGGGGCAA TCGCGGTGGT GCAAAGTGAA
GTTTTAGAGA TCCCAATTGC CGCCTTTGAA ACCTTATTAC ACACTTACCC CGCCATTGCC
TACAATATGT TGCGGCGGGT CGCGGCTCAT GTACGGCGCT CCGATGAACG GCGCTTAGAA
GATTTACGCC ATAAAAATCG GCTACTGACT GATGCTTACA CCGCGTTGGA GCAAGCCCAA
GCTGAAGCTC TACGCCGTGC TCGCGCCGCC CGCGAATTGG AGTTAGGCCG CGAATTACAG
CGCCGACTTG TGCCGACCAT CTTTCCTAAT CTGCATGGCG TGGTGATTGC TGCCGCCACC
TTTCCTGCCT ATGAGATGAG CGGTGATTTC TATGAGGTGC GCCAACTGAG CGAGCATATG
CTCTCGATTG TGATGGCCGA TGTTTGCGAT AAGGGCGCTG GAGCTGCTTT GGTTATGGCC
ATGGCCAAAG GTTTGTTGCT GGGGATGGAT CAGCGCCATC CGTTGGCTTT GGTTGAGCGT
TTCAACCAAC TGATTCGGGC AACAAACCTT GATGCTGCCG TGATTACCAT GGTTTATTCG
CATTTGGATA TTGCACGACG GCGCTTTACC TATGTACGGG CTGGCCACGA TTGGCCATTA
CATTATCGCT CCAAACAAGG CCGCGTGACC ATGCTTGAGG GCGGCGGCAT GCCAGTTGGC
ATCACTGAAG AAGCTTTTTT CGAAGAGATG CATACCGATT TAGAGCCAGG TGATGCCTTG
GTGTTTTATA CCGATGGCTT GTGCGATGCC CGCAACTTCG CTGGCGATAC CTATGGCCGT
GAACGCTTGA TTTCAGCGGT GCAAGCCTAT GGTCGCCTGC CTGCCCATGG GTTGGCCGAT
GCCATCCTTG GTGATGTTCG CGCTTTTCAA AGCGGCACAC CACCAATCGA CGATTTAACC
TTGCTGGTCG TTAAGTTCAA TCCTGAAGCG TAG
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| Protein sequence | MEFLRRVPLF ADLSLEGLQM LDSQARIRAL PADAWLFHQR DRGDACYVVV SGTLRLVLEQ
GSSEETTLGL LGVGAFFGEL SLLEPDGTRA AGAIAVVQSE VLEIPIAAFE TLLHTYPAIA
YNMLRRVAAH VRRSDERRLE DLRHKNRLLT DAYTALEQAQ AEALRRARAA RELELGRELQ
RRLVPTIFPN LHGVVIAAAT FPAYEMSGDF YEVRQLSEHM LSIVMADVCD KGAGAALVMA
MAKGLLLGMD QRHPLALVER FNQLIRATNL DAAVITMVYS HLDIARRRFT YVRAGHDWPL
HYRSKQGRVT MLEGGGMPVG ITEEAFFEEM HTDLEPGDAL VFYTDGLCDA RNFAGDTYGR
ERLISAVQAY GRLPAHGLAD AILGDVRAFQ SGTPPIDDLT LLVVKFNPEA
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