| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0473 |
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| Symbol | |
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| ID | 5732372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 552446 |
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| End bp | 553780 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641277599 |
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| Product | NusA antitermination factor |
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| Protein accession | YP_001543252 |
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| Protein GI | 159897005 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000679634 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTG ATTTTTACGC AGCTATTTCA CAGATTGCCG CTGAACGTGG CATTCCCCGC
GAGTCGGTGC AGGATGTTGT CGAACAAGCC TTAATTTCTG CCTATCGGCG CTATTTGGGC
AGTAATCCAC CACCAGTTGA CGTTAAGATT GAATTAGAGC CAAATACTGG GCGGATTCGG
GTTTACGCTG AAAAGCAAGT CGTCGATGAA GTGATGGATG ATCGCTTCGA AATCGATATT
GAAGATGCCC GTAACGTTCG CGCCGATGTT GAAATTGGCG AAACGGTTTA TGTGGAAAGC
ACGCCCGACG ATTTTGGGCG GATTGCCGCC CAAACCGCCA AACAGGTGGT ATTGCAACGG
ATCAAAGAAG TTGAACGCGA CCATATCTAT GGCGAATACT TTGATCGCGA AGGCGAAATT
GTCACTGCCA CCGTGCAGCG CACCGCCAAA GGCAACGTAA TTTTAGAAGT TGGGCGAGCC
GAAGCGATTT TGCCCCAAAA AGAGCAAATT AGCCACGACA ACTATCGCCA TGGCCAACGC
CTCAAAGTCT ATTTGATGGA AGCTCGCCGT GATGATCCGC GTGGCCCGCG CTTGGTCGCC
TCGCGCACCC ACAAAGATTT GATCAAACGC TTATTTGAAA TGGAAGTGCC CGAAATCTAC
AACGGCACGG TTGAAATTAA ATCGATCGCC CGTGAACCAG GTTTACGCTC GAAAGTCGCC
GTCCATGCCC GTCAAGAAGG CATCGATCCG GTTGGCTCGT GCGTGGGGAT GCGCGGGATT
CGGATTCAAA ATATTGTGAA TGAACTGAAC GGCGAGAAAA TCGACGTGGT GCAATGGGGT
GCTGATATGC GGGTATTTAT TGCCAACGCC CTCAGCCCAG CCCAAGTCGT CGAAGTTCAT
CTTGATGAAG GCGAAAAAAC GGCCACGGTG GTCGTGCCAG ATAAACAATT GTCGTTGGCA
ATTGGCAAGG AGGGCCAAAA CGTTCGTTTG GCAGCCAAAC TGGTTGGCTG GCGCATCGAC
ATCAAGAGCG CATCTTCACT CTTAGAGGAA GAACGGGCTG CTGCTGAAGC GCGTGAGGCT
GCCGCGTCGG AACAAATGCT GCAAGAAGCA GCGCTCTCAA CCGCCAAAGT TGAAACCCGC
AAGGTGCGGG TCGATTCCTT GGTCACCTAT CAAGGGCGAC AATATGGCCC CTTGCCAGTT
GAACTAATTG GCGAAGAAGT AGCGTTGCGA GCCGCCGCCC AAAAACTCAA TATTTATTTC
AATGACAAGC TGATTGCTAG CTATATCATC GATGATGAGG CTGGTGACAG CGACGAGACG
GATACCGAGG CATAG
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| Protein sequence | MKSDFYAAIS QIAAERGIPR ESVQDVVEQA LISAYRRYLG SNPPPVDVKI ELEPNTGRIR
VYAEKQVVDE VMDDRFEIDI EDARNVRADV EIGETVYVES TPDDFGRIAA QTAKQVVLQR
IKEVERDHIY GEYFDREGEI VTATVQRTAK GNVILEVGRA EAILPQKEQI SHDNYRHGQR
LKVYLMEARR DDPRGPRLVA SRTHKDLIKR LFEMEVPEIY NGTVEIKSIA REPGLRSKVA
VHARQEGIDP VGSCVGMRGI RIQNIVNELN GEKIDVVQWG ADMRVFIANA LSPAQVVEVH
LDEGEKTATV VVPDKQLSLA IGKEGQNVRL AAKLVGWRID IKSASSLLEE ERAAAEAREA
AASEQMLQEA ALSTAKVETR KVRVDSLVTY QGRQYGPLPV ELIGEEVALR AAAQKLNIYF
NDKLIASYII DDEAGDSDET DTEA
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