Gene Haur_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0392 
Symbol 
ID5731960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp461374 
End bp462195 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID641277515 
Productalpha/beta hydrolase fold 
Protein accessionYP_001543171 
Protein GI159896924 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAA TCGTCATTGA TGACCAAGTT GTGCATTACG AGACCTTTGG GCGTGGTCGT 
CCAGTCCTAT TTCTCCACGG CTGGCTCGGT TCGTGGCGAT ACTGGATGCC GACGATGGAA
TTCGTCTCCA AAGATTTCCG CACATATTCG TTCGATTTTT GGGGTTTTGG TGATTCAGAT
AAAACGAGTA CTGCCAAGAG CATTAGCATT ACCAATTTCT CTGATCAAGT GATTCGATTT
CTCGATGCGA TGGGCATCGA TAAGGTTCCA CTGGTTGGCC ACTCCATGGG CGGCATGGTC
GCGCTCAAAA CTGCAATCCG CCACCCCAAT CGGATTAGCC GAGTTGCGGC GATTGGTGCT
CCGATCGTTG GTACATCGCT TTCAGGCTTG CTCAAACTCA CCGATAATCA GTATGTTTCG
CGAGCGATGG CGCGAGTGCC AGTTGTCACC AAATTTTTGT TTCGCTGGTT CTTAGGCAAT
GTCAACGATA CGGCCTATGG CGAAATTCTC GACGATAGCG TGAAGCCCAC CGAAGAGAGT
TTGCGCCGCG CAGTTGGCTC GATGATGCGC ACCGATTTGC GGCCTGAACT TGAGCAATTG
ACGATTCCAA CCCTGATTAT TCATGGTGCT CGCGACGATA TTGTTAATCC CAATCAGGCC
GATATTTTCT TGCAGCGCGA TATGGCCAAC ACCCAAGTGT TTGTAATGCC TGAAAGTCGC
CACTTTCCGT TCCTCGACGA GCCAGCCCAA TTTAACAAGG TGCTTCACGC CTTCTTAAAA
CGGCCAGTCA ATGAGGCCCG CGCTGCGGCA GAAGCGGCAT AG
 
Protein sequence
MSVIVIDDQV VHYETFGRGR PVLFLHGWLG SWRYWMPTME FVSKDFRTYS FDFWGFGDSD 
KTSTAKSISI TNFSDQVIRF LDAMGIDKVP LVGHSMGGMV ALKTAIRHPN RISRVAAIGA
PIVGTSLSGL LKLTDNQYVS RAMARVPVVT KFLFRWFLGN VNDTAYGEIL DDSVKPTEES
LRRAVGSMMR TDLRPELEQL TIPTLIIHGA RDDIVNPNQA DIFLQRDMAN TQVFVMPESR
HFPFLDEPAQ FNKVLHAFLK RPVNEARAAA EAA