Gene Haur_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0294 
Symbol 
ID5732189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp346850 
End bp348679 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content52% 
IMG OID641277418 
Productcellulose-binding family II protein 
Protein accessionYP_001543074 
Protein GI159896827 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3405] Endoglucanase Y 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.558691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGC ATCGCAAAAT GTTGCTGATG GTGGCGTTGC TCACGCTACT GACCGTGCCA 
TGGTGGCAAT CCAAAGCCGC CCAAGGCAAT AGTGTTAGCC CATTATTATT CCCATACAAT
CAAGCTTCGG GCATTAACTA CAATGTGACC GATCTCACGC AGGCTTGGAA CGAGTGGAAA
AGCAACATGA TCACCGCCAA CAACGCTGGT GGCGGTAATC GGCTACGGGT GATGGGTGGG
GTCGATAGCT CATCGACGGT TTCCGAAGGC CAAGGCTATG GCATTTTGTT TGCCTCGCTA
TTCGACGACC AAACCACCCT CGATGGGTTG TGGTTGTTCA CCCGCGATCA CCTTGACCCC
AACGGCTTGA TGCACTGGCA CATTGGCAAT CCTGGCCAAT TGCGCGGCAG CTACGCCGCT
ACCGATGGCG ATGAAGATAT TGCTCTCGGC CTCGTCAATG CCTGTGTCAA AGTACGCAAG
GGCGTTTGGC CAAATAGCAG CAATGGCTTA GATTATTGTA GCCTTGCCAC CACCATGATC
AACAATATTT ACACCTATGA AGTTGATCAC CCAGGCTCAT CGCCAGTCGC TGGCTTGCCC
AGCAACCCAG GCAACGAATT ATTGCCCGGC GATGGTTGGA ATTTGGCCCG CGATTATCCC
GAAGGCATCG TCAATCTCTC GTATTTCTCG CCTGGCTATT TCACGGTATT TGGTAAATTC
ACGGGCAAGA CCAGCGAATG GGAAGCCGTC AACACCCGCA ATTATGAAAT TACCAACCTC
GCTCAATCGC GGCCAGGCAA CTGCTCGAAG CTTGTGCCCA ACTGGAACCA ATATGATGGT
GATGCCCAAT TAGTTTCGTG GCAGCCCGAA GAATATGCTT GGTGGAGCTA TGACGCTGCT
CGCTTTGCAT GGCGCGTTGC CGTCGATAAA GCTTGGTACA ACACCGCCAG CTCACGCGAA
ACCATGAACG AAGTTGGGGG GTTCTTCAGT AGCGTGGGCA TCGAAAATGT GCAGGCTCGC
TATCGGATGA ACGGCACATC AGTTGATAAT TATCGTGGTG TGTTCTTCGT CGCCAATGCT
GCTGCCGCAA TTTGGGCCGC TCCTGCACCG CAAGCTATCA ATTGTGGCGC GGCAACGGGC
ACGCTCAAAA CCAGCCCGCA ACAAGCCTAC AATATGGTGT TGACCACCAA AGATTCGCCA
AATTCATATT ATGTCAATGC TTGGCGTTTG ATGAGCATGT TGTTGTTGAC TGGCAATTTC
CCCAATATTT ATGAATTGGC CAACGGTGTT ACGCCAACCA ACACGCCTGT GCCAACCAGT
GTGCCACCAA CTAACACGGC GGTTCCAACC AACGTGCCAC CAACCAACAC AACCGTGCCG
CCAACCAGCA CACCACGGCC AACCAACACC CCTGTCACAA TCACACCGAT TTTGACCCCA
ATTCCAACCC TGACCCCGAT TCCAACCACG GTTCCGACCA GCGTGCCACC AACCAATACG
CCAATTGCTG GGGCATGCCA AATTACCTAC AGCATCAGCA ACGATTGGGG TAGTGGTTTT
ACCGCCGATG TAAGCATTCG CAACAACGGC ACAGCAATCA ACAATTGGAA TGTGCGCTGG
AATTTCGCAG GCAATCAACA AATTAACAAT CTCTGGAATG GAACTGTGAG CCAAACTGGC
CAAGCAGTCA GCGTCAATAA CGTAGGCTGG AATGGCTATA TTGGTAGTGG CGGCACTGCC
AGCTTTGGCT TCCAAGCCAG CTACAATGGC AGCAACCCCA AACCAACCAG TTTTAGCCTG
AATGGCACAG CTTGTAGCGT TGCGCCATAG
 
Protein sequence
MLKHRKMLLM VALLTLLTVP WWQSKAAQGN SVSPLLFPYN QASGINYNVT DLTQAWNEWK 
SNMITANNAG GGNRLRVMGG VDSSSTVSEG QGYGILFASL FDDQTTLDGL WLFTRDHLDP
NGLMHWHIGN PGQLRGSYAA TDGDEDIALG LVNACVKVRK GVWPNSSNGL DYCSLATTMI
NNIYTYEVDH PGSSPVAGLP SNPGNELLPG DGWNLARDYP EGIVNLSYFS PGYFTVFGKF
TGKTSEWEAV NTRNYEITNL AQSRPGNCSK LVPNWNQYDG DAQLVSWQPE EYAWWSYDAA
RFAWRVAVDK AWYNTASSRE TMNEVGGFFS SVGIENVQAR YRMNGTSVDN YRGVFFVANA
AAAIWAAPAP QAINCGAATG TLKTSPQQAY NMVLTTKDSP NSYYVNAWRL MSMLLLTGNF
PNIYELANGV TPTNTPVPTS VPPTNTAVPT NVPPTNTTVP PTSTPRPTNT PVTITPILTP
IPTLTPIPTT VPTSVPPTNT PIAGACQITY SISNDWGSGF TADVSIRNNG TAINNWNVRW
NFAGNQQINN LWNGTVSQTG QAVSVNNVGW NGYIGSGGTA SFGFQASYNG SNPKPTSFSL
NGTACSVAP