Gene Haur_0268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0268 
Symbol 
ID5732163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp315982 
End bp317025 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content51% 
IMG OID641277392 
ProductSCP-like extracellular 
Protein accessionYP_001543048 
Protein GI159896801 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTAC GTTTTCTATT GATGATGATC TTGGTTATCG GCAGTTTGAG TTTTAGCCCC 
AAACCTGCTG CTGCCCAAAC CAGCCTGTGT TTTGCCGATG TGCCAGGCAT TAGCAATTGT
ATTAGTGGGC GTTTTTTGAG CTATTGGCAA CAAAATGGTG GTTTGGCAGT GTTTGGCTAT
CCTCTCTCGC CTGCTCAAAG CGAAACAACT GCTAATGGCA CATTTACAAC TCAATATTTT
GAACGCCAAC GCTTTGAGCT ACACCCTGAA TTGGCCGCGC CCTATGATGT GCTGCTTGGC
CGTTTGGGAG CCGAAATCTA CGAACGCAAC CACGGCAACT GGCGCAATGC TCCCAAAACC
AACCCAAGCA CCCAAGGCTG TTTAGTATTT AACGAAACTG GGCGCTCAGT TTGCGAACCA
TTTTTGAGCT ATTGGCTGAA TCATGGCTTG CTTGATGGCT CGTTGAATGC CTATGAACAG
TCGTTGAGTT TGCTAGGCTT GCCGCTGACC GAGCCACTCC TCGAACAAAA CCCCGATGGC
GATTGGGTGA TGACTCAGTG GTTTGAACGC GCTCGGCTGG AAGATCATGG CGCAAAAGGT
GTGCTGCTTG GCCGTTTGGG AGCCGAACTC AAAGCCCAGC CCACCCCCAG CTATCCGAGC
GAAATCACAG CCTTGGTTGA TGCGATCAAT CGTCAACGCA ACCAAGCTGG ATTAAGCAGC
TTGACGATCA ACCCAACCCT CAACCAAGCT GCCCAAATTC ATAGCGACGA TATGGCTCGC
AACAACTTTT TCGAGCACAC TGGCAGCGAT GGCTCGAACG CAGGCCAGCG CATGCAACGG
GTAGGCTACT CATGGCGAGC TTGGGCCGAA AATTTAGCGG CTGGCTATAC CGATGCTCAA
GCAATTATCG ATGCTTGGAT GCAAAGTCCA GGTCATCGCG CCAACATTCT ATATGCCGAT
GTCAGCGAAA TTGGGGTTGG GATCGCCCGT AATCCCAATT CAGAATACCA AATTTATTGG
ACAGTCAACT TTGGAGCACG CTAG
 
Protein sequence
MRLRFLLMMI LVIGSLSFSP KPAAAQTSLC FADVPGISNC ISGRFLSYWQ QNGGLAVFGY 
PLSPAQSETT ANGTFTTQYF ERQRFELHPE LAAPYDVLLG RLGAEIYERN HGNWRNAPKT
NPSTQGCLVF NETGRSVCEP FLSYWLNHGL LDGSLNAYEQ SLSLLGLPLT EPLLEQNPDG
DWVMTQWFER ARLEDHGAKG VLLGRLGAEL KAQPTPSYPS EITALVDAIN RQRNQAGLSS
LTINPTLNQA AQIHSDDMAR NNFFEHTGSD GSNAGQRMQR VGYSWRAWAE NLAAGYTDAQ
AIIDAWMQSP GHRANILYAD VSEIGVGIAR NPNSEYQIYW TVNFGAR