| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0234 |
|---|
| Symbol | |
|---|
| ID | 5732129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 269886 |
|---|
| End bp | 271043 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277358 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001543014 |
|---|
| Protein GI | 159896767 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTATA ATGTGCTCAG CAATTATTTG AGCGCGAGTA TCACCCTAGC AATGCATATT
CTTCATGTCT ATAAAGATTA TTTTCCAGTG CTTGGTGGCA TGGAAAACCA TATTCGGGTA
GTGGCTGAGG GCTTGGCTGA ACGCGGCCAT CAAGTTACGG TGGCAGTCAG CAATACCTAC
CCAAAAACCG AAATCGAGCG CCGTAATGGT GTAGCGATTA TTAAAGCAGC CCAATGGTTG
CGCAAGGCAT CAACCCCGAT TAGCCCGATG AGTTTGCCAT TAAGTTGGCG TGTACCCGCC
GATATTATCC ATTTGCATCA TCCCTTCCCA CCTGGCGATT TGCTGTATTG GCTGCGTGGT
GGCAAGGCTA AATTGGTGAT TACTTATCAA AGCGATATTG TGCGCCAACG CCGTTTGTTG
CAACTCTATC GACCATTGCT TACCCGTACT TTGAACGCCG CCGATCGAAT TATCGCGGCC
AGCCCGCAGT ATATCCAAAC CTCGCCATGG TTGGCTCCTC ATGCCGCCAA ATGCCGCGTA
ATTCCCTTGA GCGTCGATAC CGAGCGCTTC AATCAACTTG ATCATGCGGC GATTCAGGCG
TTGCGTGAGC AGGTTGCAGC ACCCATGGTG TTGTTTGTTG GGCGCTTCCG CCATTACAAA
GGCCTGCACT TTTTGCTCGA AGCCTTGCCA AAAATTCCCA AGGCCAAATT GGTGTTGGTC
GGCATTGGCC CTGAGGAAGC TCGTTTGCGC GAGTTGGCGC AACGCTTGGG TGTTGGCGAA
CGTATTATAT GGGCTGGCGA AGTCCCGGAT CAAGCCTTAC CAAATTACTA TGCCGCTGCC
GATGTATTTG TGCTACCATC TCATTTACGA GCAGAAGCAT TTGGCATCGT GCAACTCGAA
GCATTAGCCG CTGGAATTCC AATTGTCAGC ACTGAGTTGG GCACTGGCAC AAGTTTTGTC
AACGCCCACG GCCAAACTGG GTTTGTTGTG CCACCAGCCG ATCCGGCGGC ACTGGCGCGG
GCAATCACTG TGCTGTTGGA AAATCCAGGC TTGCGGGCGC AATTTGGAGC TAACGGTCGT
CAACGCGCGA GCAGCACGTT CAGTCCACAG CGCATGCTCG ATCAGATTGA AGAACTTTAT
CGTGAGATTG TGAGTTAG
|
|---|
| Protein sequence | MFYNVLSNYL SASITLAMHI LHVYKDYFPV LGGMENHIRV VAEGLAERGH QVTVAVSNTY
PKTEIERRNG VAIIKAAQWL RKASTPISPM SLPLSWRVPA DIIHLHHPFP PGDLLYWLRG
GKAKLVITYQ SDIVRQRRLL QLYRPLLTRT LNAADRIIAA SPQYIQTSPW LAPHAAKCRV
IPLSVDTERF NQLDHAAIQA LREQVAAPMV LFVGRFRHYK GLHFLLEALP KIPKAKLVLV
GIGPEEARLR ELAQRLGVGE RIIWAGEVPD QALPNYYAAA DVFVLPSHLR AEAFGIVQLE
ALAAGIPIVS TELGTGTSFV NAHGQTGFVV PPADPAALAR AITVLLENPG LRAQFGANGR
QRASSTFSPQ RMLDQIEELY REIVS
|
|---|
| |