Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0218 |
Symbol | |
ID | 5732113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 251766 |
End bp | 253577 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641277342 |
Product | ABC transporter related |
Protein accession | YP_001542998 |
Protein GI | 159896751 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.045822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTGCAG GATTAGATAC CGAAAATTAT GATCGTCAGT ATGGCGACCG CGAATTAATG GGGCGCATGT TGAGCTATTT TCGTGCTCAT CGGCGCACCG CATTTTGGAC GATAGCCCTG ATTTGTGGCT TGGGCTTGCT CAATACAATT CCGCCATTTT TGGTCGCTCA AGCCGTTCAG CGGATTGGTG AAGCCAACCC CGATTGGAAT TTTATCTGGT TGCTTGCCAG TGGTGGGGTG GTTTTTGGAG TGCTGCAATG GGCCATGGGC TGGTTGCGCC AACGCATGAC CGCTCAAATT GTGGCCGATG TGATTAGTGC TTTACGCAAT GATGCCTTTA ACGCAGCCAT TAGCCATGAT CTCTCGTTTT TTGATGAACT GCGGTCAGGT CGAATTATTA GCCGCATCAC CTCAGATACC CAAGAATTTG CCCAAGTTTC ACGCTTGATC ATCGAAATTG TCAGCCAAGT GCTAACGGTG ATTGCGCTGT TAGTCTATTT GCTCAGCGTT TCAGTGCCGC TCAGCTTGGG GATTATTGGC TTCACCCCGA TTGTGATTGG CTTGGCTTTA GGCTTTCGGC GTTTGGCGCG TTTCGTCACC CGCAAAGGCT TTCAGGTGCT GGGCGAGGTC AATAGCTCAA TTCAAGAAGC GGTAACGGGG ATTAGCATCG CCAAGAATTT TCGCCAAGAA GCCCGCATTT ATGGTGAATT CAGCGAGATC AACCAACAAT CGTATGGAGT TAACCTACGA CGTGGTTTTG TGCTCTCGAA TGTGTTCCCA ACCTTGAACA TTGTTTCAGG CTTTGGCACG GCGGCCTTAA TTTATTGGGG CGGCTTGTCG GTGATCGATC TCACAATTAG TTTGGCAGCT TGGTATGTCT TTGTGCGCTC GGTTGATCTG TTTTGGTTTC CATTGCTGAA TATCTCGGCT TTTTGGAGCC AATTTCAAGC TGGCTTGGCG GCGGCTGAGC GCATTTTTGC CTTGATTGAT GCCGAACATA GCGTCAAACA ACACGATCAG CAAACCACCA AACGCCTGCG CGGCGAAATT GTGTTCGATC ATGTTGAGTT TCGCTATGGG CGCAAAGAGC CGGTGCTGAA CGATTTTAGC CTCAATATTG CTCCAGGCGA GAGCATCGCC TTAGTTGGGC ATACGGGCGC TGGCAAATCG AGTATCGCCA AATTGATCAC CCGTTTCTAT GAGTTTCAAT CAGGCAAGAT TACGGTCGAT AGCCATGATA TTCGCAGCTT GGATTTGCGC AGCTATCGTC AGCAATTGGG AATTGTGACC CAAACTCCAT TTTTGTTTGA TGGCACAGTT GCCGATAACA TTCGCTATGC AGCGCCCCAA CTGAGCGATG CCGAGCTTGA AGCAGTTGCC AACCAAATTG GCGGCGGCGA ATGGCTGGAA ACCTTGCCCC AAGGCTTGCA ATCGCAAGTT GGCGAGCGCG GCAATAAACT TTCGCTTGGG CAACGCCAGC TGGTAGCTTT GACGCGGGTC TTGGCGGCGC AACCAGCGAT TTTTATTCTC GATGAAGCAA CTGCCAGCAT CGACCCATTT ACTGAAACCC AAATTCAGCA AGCCATGGAT TTGATTCTTT CGCGCTCGAC GGCAATTTTG ATTGCCCACC GCCTTTCGAC CGTGCGCTCG GCGGATCGAA TTATTGTGTT GAATCAAGGC CAAATTATCG AAGAAGGCAA CCACGATCAG CTGATGCAGC AAGGCGGGCA TTATGCCGAT TTATATGATA CCTACTTCCG CCATCAATCG TTGAGCTACA TCGAATCGCG CGGGGCAGTA CGCAGCGTTT AG
|
Protein sequence | MFAGLDTENY DRQYGDRELM GRMLSYFRAH RRTAFWTIAL ICGLGLLNTI PPFLVAQAVQ RIGEANPDWN FIWLLASGGV VFGVLQWAMG WLRQRMTAQI VADVISALRN DAFNAAISHD LSFFDELRSG RIISRITSDT QEFAQVSRLI IEIVSQVLTV IALLVYLLSV SVPLSLGIIG FTPIVIGLAL GFRRLARFVT RKGFQVLGEV NSSIQEAVTG ISIAKNFRQE ARIYGEFSEI NQQSYGVNLR RGFVLSNVFP TLNIVSGFGT AALIYWGGLS VIDLTISLAA WYVFVRSVDL FWFPLLNISA FWSQFQAGLA AAERIFALID AEHSVKQHDQ QTTKRLRGEI VFDHVEFRYG RKEPVLNDFS LNIAPGESIA LVGHTGAGKS SIAKLITRFY EFQSGKITVD SHDIRSLDLR SYRQQLGIVT QTPFLFDGTV ADNIRYAAPQ LSDAELEAVA NQIGGGEWLE TLPQGLQSQV GERGNKLSLG QRQLVALTRV LAAQPAIFIL DEATASIDPF TETQIQQAMD LILSRSTAIL IAHRLSTVRS ADRIIVLNQG QIIEEGNHDQ LMQQGGHYAD LYDTYFRHQS LSYIESRGAV RSV
|
| |