Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0118 |
Symbol | |
ID | 5732013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 152689 |
End bp | 153891 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641277242 |
Product | elongation factor Tu |
Protein accession | YP_001542898 |
Protein GI | 159896651 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0332354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAGC AAAAGTTCGA GCGGAACAAG CCCCACATCA ACATTGGGAC GATCGGGCAC GTTGACCACG GCAAGACGAC CTTGACCGCT GCCATCACCA AAACCATGGC ACTGCGTGGC CGCGCTGAAT TCCGCGCCTT CGACCAAATC GACAATGCTC CCGAAGAACG CGCTCGTGGG ATTACGATTT CGATTTCACA CGTCGAGTAT GAAACCGAAA ATCGCCACTA CGCCCACGTG GACTGCCCCG GCCACGCCGA CTATATCAAG AACATGATCA CCGGTGCTGC CCAAATGGAC GGCGCAATCT TGGTGGTGTC AGCGCCCGAC GGCCCGATGC CCCAAACCCG CGAACACATC CTCTTGGCTG GCCAAGTCGA AGTGCCTGCG ATGGTGGTCT TCTTGAACAA AGTTGACATG ATGGACGACC CTGAGTTGCT CGAACTGGTT GAAATGGAAT TGCGCGAGTT GCTGTCAAAA TACGGCTTCC CGGGCGACGA AATTCCGATC GTGCGTGGCT CAGCCAAAGG CGCATTGGAT AGCGCATCAA CCGATGCAAG CCAACCCGAG TATCAATCGA TCCAAGAATT GATGCAAGCG GTTGACGATT ATATCCCAAC GCCAGAACGC GCCATCGACA AACCATTCTT GATGCCGATT GAAGACGTGT TCTCGATCAA AGGCCGTGGC ACCGTGGTGA CCGGTCGGAT CGAACGCGGG ATCGTCAAGG TTGGCGATAC GATTGAAATC ATCGGGATGG GACCAGACGT GCGCACGACG GCAGTAACCG GCGTGGAAAT GTTCAAGAAG TTGCTGGACG AAGGTCGCGC AGGCGACAAC GTTGGGGCAC TCTTGCGCGG GATTGAACGA ACGGACGTGG AACGCGGTCA AGTCTTGGCA AAACCAGGCT CGATCAAACC ACACACCAAG TTCAAGGCCG AGGTCTACGT GTTGAAGAAA GAAGAAGGTG GCCGCCACAG CCCATTCTTC AGTGGCTATC GCCCCCAATT CTACGTTCGG ACGACGGACG TGACGGGTGC GATTGGCTTG CCCGAAGGCG TGGAAATGGT GATGCCAGGC GACAACATCC AAATGACGGT GGAGTTGATC GTTCCGGTAG CTATCGAACA AGGCTTGAAG TTTGCGATTC GTGAAGGTGG CCGCACCGTG GGTGCTGGCA TCGTGACCGA AATTATCGCC TAA
|
Protein sequence | MAKQKFERNK PHINIGTIGH VDHGKTTLTA AITKTMALRG RAEFRAFDQI DNAPEERARG ITISISHVEY ETENRHYAHV DCPGHADYIK NMITGAAQMD GAILVVSAPD GPMPQTREHI LLAGQVEVPA MVVFLNKVDM MDDPELLELV EMELRELLSK YGFPGDEIPI VRGSAKGALD SASTDASQPE YQSIQELMQA VDDYIPTPER AIDKPFLMPI EDVFSIKGRG TVVTGRIERG IVKVGDTIEI IGMGPDVRTT AVTGVEMFKK LLDEGRAGDN VGALLRGIER TDVERGQVLA KPGSIKPHTK FKAEVYVLKK EEGGRHSPFF SGYRPQFYVR TTDVTGAIGL PEGVEMVMPG DNIQMTVELI VPVAIEQGLK FAIREGGRTV GAGIVTEIIA
|
| |