Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0108 |
Symbol | |
ID | 5732001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 140794 |
End bp | 141606 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641277230 |
Product | membrane protein-like protein |
Protein accession | YP_001542888 |
Protein GI | 159896641 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | [TIGR02737] cytochrome c oxidase assembly factor CtaG |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACT GGACGCTTGA TTGGCCGCTG CTTTTTGGCT TAATCGCCGC AACAGTTGGC TATCTCTGGG CAGTTGGCCC AGCTCGCAAG CGCCTAGGCG GGCCAGCAGC CTTCCCAGTC GGGAAGGCTG TTGCCTTCTT AAGCGGCTTG TTGGCGCTTG GTTTGTCGAT CATGTCGCCA ATTGGCATTT GGGCTGATCG CTATCTTTTT ACCATGCACA TGGTTCAACA TATGATTTTG ACCATGTTTT GTGCCCCAAT GTTGTTAATT GGCATCCCCG AATGGCTACT GCGGCCTTTG GTGCAATTGC CATGGGTTTA TAGTATTGTG CGTTTTGCCG TCAACCCAAT CGTGGCATTT AGTGCCTTTA ATATTTCCTT CAATGGCTGG CACTTTCCCC AATTCTACGA TTTGGCCTTG CGCAACGAAC TGGTGCACAT TCTCGAACAT CAAATGATGA TGGGCAGCGC AATTTTATTG TGGGCACCAT CGCTAATTCC GTTGCCCGAA TTACGCTCGT CGTATCCGGT GCAGATGCTC TATTACTTTG TGAATTCAAT TATCCCAACG ATTTTGGGTG CCTTGATCAC CTTTGCTGAT AGCGTGTTGT ACCCAACCTA CGAGCTAGCG CCACGGATTT GGGGCATCAG CGCGATTGCC GATCAACAAA TTGGTGCGTT GATTATGTGG ATTCCTGGTG GCTCGATTTT TATCCTAGCA ATCACCATCG CTTTCTTCAA ATGGATGAAC CGCGAGGATG AAGAACAAAG CCTACCGAGC ATTGCCGACC AAAAAGCGGC GGCTCGCCAG TAA
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Protein sequence | MNDWTLDWPL LFGLIAATVG YLWAVGPARK RLGGPAAFPV GKAVAFLSGL LALGLSIMSP IGIWADRYLF TMHMVQHMIL TMFCAPMLLI GIPEWLLRPL VQLPWVYSIV RFAVNPIVAF SAFNISFNGW HFPQFYDLAL RNELVHILEH QMMMGSAILL WAPSLIPLPE LRSSYPVQML YYFVNSIIPT ILGALITFAD SVLYPTYELA PRIWGISAIA DQQIGALIMW IPGGSIFILA ITIAFFKWMN REDEEQSLPS IADQKAAARQ
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