| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0081 |
|---|
| Symbol | |
|---|
| ID | 5731974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 105986 |
|---|
| End bp | 106990 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277203 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_001542861 |
|---|
| Protein GI | 159896614 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG AACAAAATGA ACGCGATATT GAGGAAGCCT TGGCCGAAAT TGGCGACCAT
AATCGCCCAA TTGTCTTGAG TGAACTCAAA GTTTTTAACG ACCTTGACCA AGATGAAACT
GAGATTTTTG AAATTGAATG GCTGCGCATC GAGCCAAGTC ATCGGCGTAA TTTGGCTCAA
GCGATGCAAG AGGTTGGTGA GGCCAGCCTT GAGCTTGATT TTCGCGCCGT ATTTAGCATT
TTGCTGACCG ACCAAGATCC TGCAATTCGC ATTGCAGCAG TCAAAGGTAT GGCCGAAGAT
ACCCGCCGCT CAAGTTTGCG CCGTTTAAGC GAATTGCTTA CAACCGATCC CGATGATGGG
GTGCGAGCTA ATGCGGCGAT CACGCTTGGT GCTTGGGCTT TACGCGCAGG CGAAGGCAAT
CTCGATCAGC GTACCAGTAA TGAATTATTG CAAACGCTCT GGGCCGTTTT TGATGATCGC
CAAACCTCGA CCTTGGTACG CCAACGCTTG TTGGAAACCT TGGGCTACTT GGCCGATAGC
GATCCACGAG TCAATCAGGA AATTGGGGCA GCTCACCAAC GACTTGATGA TGGTTGGCAG
GCCGCCGCGC TTTGTGCCAT GGGTCGCACT GGCTTAGATC AATGGTTGCC AACAATTACA
GCTAGTTTGC GTTCCCATGA GCCATTGTTA CGTTTTGAGG CAGTGCGGGC CGCTGGTGAG
CTTGGCGATT TAGCCGAATC GATTGTCAAC CACGTGGCGC GGGCTACTGC TGATGGTGAT
GTTGAAGTTG CTACAACTGC GATTTGGGCA TTGGGCCAAA TTGGTGGCGC TGCTGCGCGA
CGCTTTCTCG AACAATTAGT CAACGATTCA GAGGGTGTTC GGCGTGAAGC CGCTGCCGAA
GCACTCAAAG AATTGCAATT CTTCGACGAT CCCATACAAT CCTTGCCCCT CGACGACGAT
GAGGACGAGG ACGAATATTG GTATGGCGAT GACGAGGACG AGTAA
|
|---|
| Protein sequence | MTEEQNERDI EEALAEIGDH NRPIVLSELK VFNDLDQDET EIFEIEWLRI EPSHRRNLAQ
AMQEVGEASL ELDFRAVFSI LLTDQDPAIR IAAVKGMAED TRRSSLRRLS ELLTTDPDDG
VRANAAITLG AWALRAGEGN LDQRTSNELL QTLWAVFDDR QTSTLVRQRL LETLGYLADS
DPRVNQEIGA AHQRLDDGWQ AAALCAMGRT GLDQWLPTIT ASLRSHEPLL RFEAVRAAGE
LGDLAESIVN HVARATADGD VEVATTAIWA LGQIGGAAAR RFLEQLVNDS EGVRREAAAE
ALKELQFFDD PIQSLPLDDD EDEDEYWYGD DEDE
|
|---|
| |