Gene HY04AAS1_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1539 
Symbol 
ID6744370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp1456436 
End bp1457008 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content34% 
IMG OID642751360 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002122200 
Protein GI195953910 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.731559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTG AGTTTATAAG AACAGATATA AAAGAGGTGA TACTGATAAA GCCAAAGGTC 
TTTAAAGACG AAAGAGGGTT TTTCTTAGAA AGCTATAAAA AATCTGAGTT TGAGAAAAAC 
GGCATAACAG ATATCTTTAT CCAAGATAAT CATTCAAAAT CTGTAAAAGG AGTATTAAGG 
GGCCTTCATT ACCAAAAAGA ACCAGAAGCT CAAGGAAAGC TTGTAAGATG TATAAAGGGT 
AAAATATTTG ATGTGGCTGT AGATATAAGA AAAAATAGCC CCACTTACGG CAGATGGGTA 
GGGTATGAGC TCTCAGAAGA AAATAAACTG ATGCTTTTTA TACCAAAGGG CTTTGCCCAT 
GGGTTTTTGA CCCTTTCAGA AGAAGCTGAG ATCATATACA AAGTATCTGA GGCCGAGTAT 
TCAAAAGAAC ACGACAAAGG TATAATATGG AACGATAAAA CCATAAACAT AAAATGGCCT 
TTAGAAAATA TAAAAGAGGT TATTTTATCT GATAAAGATA AAAATCTACC AACACTAGAA 
CAAGCAGACA ACAACTTTTT ATACGGAGGA TAA
 
Protein sequence
MPFEFIRTDI KEVILIKPKV FKDERGFFLE SYKKSEFEKN GITDIFIQDN HSKSVKGVLR 
GLHYQKEPEA QGKLVRCIKG KIFDVAVDIR KNSPTYGRWV GYELSEENKL MLFIPKGFAH 
GFLTLSEEAE IIYKVSEAEY SKEHDKGIIW NDKTINIKWP LENIKEVILS DKDKNLPTLE 
QADNNFLYGG