| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1536 |
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| Symbol | alaS |
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| ID | 6744367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1451996 |
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| End bp | 1454566 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642751357 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002122197 |
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| Protein GI | 195953907 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000027092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG ACGAAATAAG GGAAAAGTTT TTATCTTTTT TTGAAAATAA AGGGCATACC
GTTGTGAAAA GTTCTTCCAT AGTACCTAAA AGCGATCCTA CGCTTCTTTT TGTAAATGCT
GGTATGGTAC CTTTTAAAAA TGTATTCTTA GGGCTTGAAA GTCTTCCTTA CAAAAGAGCT
ACCTCTTGTC AAAAGTGTTT CAGAGTATCA GGCAAGCACA ACGACCTTGA AAGCGTAGGA
AGAACCACAA GACATCATAC GTTTTTTGAA ATGCTCGGAA ACTTTTCCTT CGGAGATTAC
TTTAAGAAAG AGGCCATACT TTACGCTTGG GAGTTTGTTA CAGAGGTTTT GAGACTACCA
AAAGATAAGA TATATGTAAG CGTTCATCAA AACGATCAAG AAGCTTACGA CATATGGAAA
GATATGGTAA AAGTGCCAGA GGACAAAATA TGGCGTATGG GGGATGAAGA TAACTTTTGG
CAAATGGGAG AGACTGGTCC TTGCGGATAT TCTTCTGAAA TTTACATAGA TAGGGGAGAA
AAATATTCTC AAGATGAAAG ATATCTAGAA ATATGGAACC TCGTTTTTAT GCAGTTTAAC
AAAGATGAAT CAGGACATAT GGAACCTTTA GCCAAACCCT CTATAGACAC TGGTATGGGG
CTTGAAAGAA TAGCATCTGT CATACAGGGC AAAGACTCGA ATTTTGAGAT AGATATTATA
ATGCCTATTA TACATTTTGT AGAAGATCTT TCTTCTAAAC GCTACAAAAC CGATGAAGAA
ACTGATATTG CTATGAGGGT TATAGCCGAT CATTCAAGAG CTTGCACCGT AGCCATATCT
GAGGGTATTA TACCTTCCAA CGAAGGAAGA GGCTATGTGG TAAGAAAAGT CTTAAGAAGA
GCCGTAAGAT TTGGCTATAA GATAGGTATA AAAGAAGAGT TTTTATACAA AAGCATAGAT
GTGGTGGTGG ATACGCTAAA AAACGCATAT CCAGAGCTTG AAATGAGCAA AGAGTTTGTT
AAAAATATAA TAAAAGCTGA AGAATCGAGA TTTTTAGAAA CTTTGGAAAA CTCTTTGGAG
CTTTTCGATA GATACATAGC TGAGAACAAG TCAAACGTTA TAAGTGGAGA TTTTATCTTT
AAAGCTTACG ATACTTACGG ATTTCCTTTA GATATACTTC AAGAGATGAC CCATGAAAAA
GGTATGACCC TTGATATGAA AGGTTTTTAT GAGCTTTTAG AAAAACAAAA AGAAGAATCA
AGAAAACACT TCAAAAGCGA AGAAAAGGTG GATGAGGTAT ACCTTAGCAT AAAAGACAAG
GCAAGATCAA TCTTCACAGG ATACACACAC ACCGAAGAAC AAGCAAAAGT CCTTTTCATA
ATAAAAGATG GTAAAATGAC AGAAGAGCTA AAAGAACAAG AAGATGGTAT CATCATCCTT
AACAAAACAC CTTTTTATCC AGAAAAAGGC GGTCAGATAG GAGACAGTGG TATACTTGAA
AACAGCGAAG CACTTTTTAT AGTAAACGAC ACCAAAACCC CAACGGATGG GGTAATAGCT
CATATAGGAA AAGTAATAAA GGGAAGGCTA AGAGTAGGCA CAGACGTACT TGCAAAAATA
GATAAAGAAA GAAGAGAGGA TATAAAAAGA CATCACACCT CTACGCATCT TTTGCATGCA
GCTTTGAGAA ATATGTTTGG TGAATCTGTA AGACAGGCCG GTTCTTACGT GGGAGATGAG
TTTTTAAGGT TTGATTTTAC GTTTTATAGA AGCCTAAAAC CAGAAGAGTT AGAAGCTTTG
GAAGCGATGA TAAACGAAGA GATTATGAAA AATGAAGAAA TATTTGTAAA AGAGCTTCCA
TACCAAGAGG CTATAAAAAC TGGGGCTATA GCAATATTTG AAGAAAAATA CGGTGATGTA
GTAAGGGTAA TAAGCGCTGG AGATTTTTCC AAAGAGCTTT GCGGCGGAAC CCACGTAAAA
AGAACCGGAG ATATAGGCTA TTTTAAACTA ATATCAGAAT CATCTGTAGG AGCAGGTATA
AGGCGTATAA TTGCAAAGGC TGGTAGAAAA GCTGTAAGAG AGGCCTATGA AGATAGCAAG
CTTTTAAAAA CCATATACCA AGAAATAGGT GCCAACAAGC AAAACCTTTT AGAAAGGGTA
ATAGCTCTAA AAGAAGAGCT AAAAGAAAAA GACAATCAAA TTCAAATGTT AAAGTCTAAA
TTAGTAAGGT TAGAAGCTAA AGCCTCTTTA AACATAGAAC AAATAAACGG TATAAAACTA
TACTGGGGTA TATTAGAAGA AGCTTCTTTG GACAATCTTA GAGAGATAGC AGATTCCTAT
AGACAGCATC CAAACACGGT GGTGTTTTTA GTTTCTAAAA GCCCAAAAAA GAGTATACTC
ATAGCTAGAT CAAAAGATTT AAACTACGAT ATGAAAGCTA TTATAAAAGA TATAGCAAAA
CCAATGGAAG GGTCTGGCGG CGGTAGAGAA GATTTAGCTC AAGGAGGGGT TCAAAAGATA
GAAACGTTTA ACAGCGCTTT AGAAGTGTTG AAGAGCATTT TAAGTAAATA A
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| Protein sequence | MKTDEIREKF LSFFENKGHT VVKSSSIVPK SDPTLLFVNA GMVPFKNVFL GLESLPYKRA
TSCQKCFRVS GKHNDLESVG RTTRHHTFFE MLGNFSFGDY FKKEAILYAW EFVTEVLRLP
KDKIYVSVHQ NDQEAYDIWK DMVKVPEDKI WRMGDEDNFW QMGETGPCGY SSEIYIDRGE
KYSQDERYLE IWNLVFMQFN KDESGHMEPL AKPSIDTGMG LERIASVIQG KDSNFEIDII
MPIIHFVEDL SSKRYKTDEE TDIAMRVIAD HSRACTVAIS EGIIPSNEGR GYVVRKVLRR
AVRFGYKIGI KEEFLYKSID VVVDTLKNAY PELEMSKEFV KNIIKAEESR FLETLENSLE
LFDRYIAENK SNVISGDFIF KAYDTYGFPL DILQEMTHEK GMTLDMKGFY ELLEKQKEES
RKHFKSEEKV DEVYLSIKDK ARSIFTGYTH TEEQAKVLFI IKDGKMTEEL KEQEDGIIIL
NKTPFYPEKG GQIGDSGILE NSEALFIVND TKTPTDGVIA HIGKVIKGRL RVGTDVLAKI
DKERREDIKR HHTSTHLLHA ALRNMFGESV RQAGSYVGDE FLRFDFTFYR SLKPEELEAL
EAMINEEIMK NEEIFVKELP YQEAIKTGAI AIFEEKYGDV VRVISAGDFS KELCGGTHVK
RTGDIGYFKL ISESSVGAGI RRIIAKAGRK AVREAYEDSK LLKTIYQEIG ANKQNLLERV
IALKEELKEK DNQIQMLKSK LVRLEAKASL NIEQINGIKL YWGILEEASL DNLREIADSY
RQHPNTVVFL VSKSPKKSIL IARSKDLNYD MKAIIKDIAK PMEGSGGGRE DLAQGGVQKI
ETFNSALEVL KSILSK
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