| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1440 |
|---|
| Symbol | |
|---|
| ID | 6744266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1359234 |
|---|
| End bp | 1360964 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642751258 |
|---|
| Product | PHP domain protein |
|---|
| Protein accession | YP_002122103 |
|---|
| Protein GI | 195953813 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1796] DNA polymerase IV (family X) |
|---|
| TIGRFAM ID | [TIGR01856] histidinol phosphate phosphatase HisJ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0200406 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCA CTAAAGATAT AGCAAAACTC TTTAAAGAGA TGGCTCTGGC GGCGGAGTTT
CTGGGGGAGA ACAAATTTAG AGTGTTGGCT TATCAAAAGG TAGCAGACAT TCTTTTTGAA
ATAGATAAAG ATATAAAAAG CGTAGATGAG CTAAAAGAGT ATCTTACCAC AAACCAAATA
CACGGTATAG GGGAATCTTC TTTAGAAAAG ATAGAAGAGT ATCTAAAAAC TGGCCGTATA
AAAAAACATT ATGAGTTTTT GCAAAAAGTC CCAAAAGAAC TTCTTGATAT AATGGATGCT
CCAGGTATTG GGCCCAAGAC TCTTAAGACC CTTTATGATG TTTTTGGCAT AAAAAACAAG
GAAGAACTTT TAAAAGCTTT AGACGACCCA CGTATAAAAA CCATAAAAGG CTTTGGTCCT
AAAAAGATAG AAAACATAAA AAGAGGTATA GCTCTTTTTG AACAATCAAA AGAGAGGATG
TTTATAACAG AAGCCTATTC TTTGGCTCAA GACATACTTA GCTACATGAA AGGCTGTAAA
GAGATAATAA ACATATCGGT GGCTGGTTCT TTAAGGCGCA TGAAAGAAAC CATAGGGGAT
ATAGATATAC TAGTGTCTAC CAAAAAAGAA GATTTTCCAA AGGTTCATGA GTATTTTAAA
GCTTATAAAG ATATGGAACA AGTCATTGGA AGCGGTGAAA CAAAGACATC TATTCTTCTT
AAAAACTCAA AACAAGTGGA TTTAAGGGTT TTAAAAGAAG AAGAATGGGG TTCAGGCCTT
CAGTACTTTA CAGGCTCTAA AGAACACAAT ATAAAGATAA GGGATATCGC AAAAGAAAAA
GGTTACAAAA TAAGCGAATA CGGTATTTTT GAAATATCTT CTGGTAAAAG GCTTGGTGGT
GAAAAAGAAG AAGATATTTA TAAGATTTTG GATATGGTGA TGCCCCCGCC TGAGATAAGA
GAAGATAAAG GTGAGATTGA ACTTGCCATG CAAGGCATAG TACCAGAGTT AGTGGGTTAT
GATGATATAA AAGGGGATTT TCATATGCAT ACCACATACT CAGATGGTAA AGCCTCTTTA
AGGCAGATGG TACAAGCATG CTACGAGCTT GGGTATAGGT ATATCGTAAT ATCAGATCAT
ACCAAATCTC TAAGAGTAGC AGGCGGTTTA GATGAAGAGG GCTTTAGAAA TCAATGGAAA
GAGATAGAGC AAGTCCAAAA AGAATACAAA GATATGACTT TACTAAGGGG CTGTGAGGTG
GATATATTAG AAGATGGGTC TTTGGATTTG CCAGATAGCT TTTTAGAGGA GTTTGACTAT
GTAATAGCTT CTATACACTC TCACATGTCA CCGAGCACTG ATAACACAAA GCGCGTTTTA
AAAGCTTGTC ACAATAAATA CGTAAATCAG ATAGGCCATC CCACTGGTAA AAATTACGGC
TATAGAGATG GATACATACT AAATATGGAA GAGGTTATAA AAGCAGCCCT TGATACCAAC
ACGGCGTTAG AGCTAAACAT TCCAAGAGCA GATTTATCAC CAGACAACAT AAGGCTTGCA
GTAGAAAGAG GGGTAATAAT AAGTATTGTT ACAGATTCTC ATTCTTCTTC TTATCTTCGG
TTTATGAAAG TAGGGGTTGG GCTTGCAAGA AGAGGTTGGG CTTTGAAAGA ACGCGTTTTA
AACACAAAGC CCTTAGAAGA GGTGAGAGCT TTTGTCCGAA AAAAGCGCTA A
|
|---|
| Protein sequence | MASTKDIAKL FKEMALAAEF LGENKFRVLA YQKVADILFE IDKDIKSVDE LKEYLTTNQI
HGIGESSLEK IEEYLKTGRI KKHYEFLQKV PKELLDIMDA PGIGPKTLKT LYDVFGIKNK
EELLKALDDP RIKTIKGFGP KKIENIKRGI ALFEQSKERM FITEAYSLAQ DILSYMKGCK
EIINISVAGS LRRMKETIGD IDILVSTKKE DFPKVHEYFK AYKDMEQVIG SGETKTSILL
KNSKQVDLRV LKEEEWGSGL QYFTGSKEHN IKIRDIAKEK GYKISEYGIF EISSGKRLGG
EKEEDIYKIL DMVMPPPEIR EDKGEIELAM QGIVPELVGY DDIKGDFHMH TTYSDGKASL
RQMVQACYEL GYRYIVISDH TKSLRVAGGL DEEGFRNQWK EIEQVQKEYK DMTLLRGCEV
DILEDGSLDL PDSFLEEFDY VIASIHSHMS PSTDNTKRVL KACHNKYVNQ IGHPTGKNYG
YRDGYILNME EVIKAALDTN TALELNIPRA DLSPDNIRLA VERGVIISIV TDSHSSSYLR
FMKVGVGLAR RGWALKERVL NTKPLEEVRA FVRKKR
|
|---|
| |