Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1361 |
Symbol | |
ID | 6744185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1274707 |
End bp | 1276818 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642751177 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_002122024 |
Protein GI | 195953734 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.011666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACGT TAGATAAAAC CAACGAAAAA CTCATAGAAG ATATTTTAAA CAAATACAAA GAGCATGAGG ATGTTATAAG CAAAGCTATA GATTTTATAT ATCAAAAGCA TGAAAACCAA ACAAGAAAAT CTGGAGAACC CTACGTAAAC CATCCTATAG CAGTAGCCAG CATATTAGCT TCTATAGGGA TGGATTATCA TAGTATTGTG GCTGGGCTTT TACACGACGT AGTAGAAGAT ACTGATACTA CCGTTGAGGA GATAAAAAAA GAGTTTGGCC CTCAGATCGC AAGCCTAGTG GATGGCCTTA CCAAGATAGA CAAGTATAAG TTTTCTTCAA AAGAACATGC AAAGGCTGAA AACTATAGGA AAATGCTTTT TGCTATGTCA AAGGATGTAA GGGTCATAGT CATAAAGCTA GCAGACAGAC TACACAACAT GAGAACCCTT GATTACATGC CGAGGCACAA ACAGCTTGAA ATAGCCAATG AGACTATAGA TATATACGCT CCGATAGCCC ATAGGCTTGG AATATGGAGC ATAAAGAAAG AGCTGGAAGA CCTTTATTTA AAATACACGC ATCCTGAAGA GTACGAAAAA ATAAAAGATT TTGTCCAAAA AATAAGTACA GAATCAGAGG TTTATCTAAA AAAATACTTT ATATCGAAAG TGGTAGAAGC CATAAACGAT TTTTTCAAAG ATAAAAAACC AAACTACACC ATACAATATA GACAAAAGCA TATATACAGC ATATATCAAA AGCTAAAACG AAAAAATCTA AGCTTGGAGG ATTTACAGGA TATTCTTGGC ATAAGGGTGA TAGTAGAGGA TGTGGCAGAG TGTTATACTG TTTTAGGTAT AGTTCATAGT ATTTTTAGGC CTATACCAGG AAGCTTTGAT GATTACATAT CGCTTCCAAA ACCAAACATG TACCAATCTC TTCATACTGC CGTGGAAGGG CCCAAAAAGA GAGTTGTGGA GGTACAGATA AGGACTTACG AAATGCACGA GAGAGCTGAA AAGGGTATAG CAGCTCACTG GGCTTACAAA GAAAATTCCT CTACAAAAGA CAACTCCATA TTTGCATGGT TAAGAGAGGT GTTAAATAGC ATAAAAACCA AAAACGCCAA TGAGCTCATA GAAGCTGTTA AAGATGAGCT TTTCGAAGAT GAGGTATTTG TATTTACTCC AAAAGATGAT GTTGTAGTGC TTCCAAAAGG TGCAACGGTG CTTGATTTTG CATATTACAT ACATACAGAT ATAGGAAACC ACTGTCAAAG GGCTATAGTA AACAACAAGA TAGTGCCTCT TTCTTATGTG CTTCAAAGCG GTGATAGGGT AGAAATTATA ACAAACCCCT CTCAAAGCCC AAAAATAGAA TGGCTTAAGA TTGTAACCAC AAAAAAAGCA AAAACTCGTA TTAGGCTTTT CTTGAAAGCA AAAGAAAAAG AAGTGGCTAT AGAAGAAGCT CACAAAACCC TTTTAAAGCT TTCAGAGAAA CTAAGTTTAG GTTTCGAAGA TATGATAAAA AAACTCAGTT CTCATTTTGA TTTAAACGAG CAGGAGCTTT TTGCAAACAT AGGTTTTGGT AAAATCCCAA TAAACAGGGT AATAAAGCTG TTTTCCAAAG AAAAAGAGCA AAAACATATA AAAGACGAGG GTAAAGAGGG GTCTTTAAAA CTTGAGAGCG TATCAAACGT GCTTTTTAGT GTAGCGAAGT GTTGTATGCC AATTCCAGGA GATCCAGTAA TGGGGGTTAT ATCAAAAAAC GCTGGTATTG TTATACATCA TGAGAAATGC CCAAACCTTC AATACGCCAT TAGAAATATA CCTCAAAAAG TGGTAAAAAT AGACTGGAAG TCCCAAGACA AGTTATATAC CACAAGGATG AGAGTTGTAG CTTCAGATAG ACCTGGCATA CTTTCAGAAG TGTCTTCTGC TTTTACAAAA TCAAACATAA ACATAGTAGA AGCTTCTACA AAAACCAACA ACCTCAACAT AGCAAACATG GATTTTAAAG TGCAATTAAG AAACACAAAA GACTTAAAAA GAGCTTTTGA CGAAATAAAA TCTATAAAAG GTGTAGAATC TGTAAAAAGG GTGTTTGGAT GA
|
Protein sequence | MKTLDKTNEK LIEDILNKYK EHEDVISKAI DFIYQKHENQ TRKSGEPYVN HPIAVASILA SIGMDYHSIV AGLLHDVVED TDTTVEEIKK EFGPQIASLV DGLTKIDKYK FSSKEHAKAE NYRKMLFAMS KDVRVIVIKL ADRLHNMRTL DYMPRHKQLE IANETIDIYA PIAHRLGIWS IKKELEDLYL KYTHPEEYEK IKDFVQKIST ESEVYLKKYF ISKVVEAIND FFKDKKPNYT IQYRQKHIYS IYQKLKRKNL SLEDLQDILG IRVIVEDVAE CYTVLGIVHS IFRPIPGSFD DYISLPKPNM YQSLHTAVEG PKKRVVEVQI RTYEMHERAE KGIAAHWAYK ENSSTKDNSI FAWLREVLNS IKTKNANELI EAVKDELFED EVFVFTPKDD VVVLPKGATV LDFAYYIHTD IGNHCQRAIV NNKIVPLSYV LQSGDRVEII TNPSQSPKIE WLKIVTTKKA KTRIRLFLKA KEKEVAIEEA HKTLLKLSEK LSLGFEDMIK KLSSHFDLNE QELFANIGFG KIPINRVIKL FSKEKEQKHI KDEGKEGSLK LESVSNVLFS VAKCCMPIPG DPVMGVISKN AGIVIHHEKC PNLQYAIRNI PQKVVKIDWK SQDKLYTTRM RVVASDRPGI LSEVSSAFTK SNINIVEAST KTNNLNIANM DFKVQLRNTK DLKRAFDEIK SIKGVESVKR VFG
|
| |