Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1336 |
Symbol | |
ID | 6744155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1245364 |
End bp | 1247037 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642751147 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_002121999 |
Protein GI | 195953709 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0436737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTG CTTTAGGTAG GCATGTTGTT GTTAAAAGTC AAATACAGAG TTTAGATGAT TCGGCGGATT TATATAGCTT AGTTTTTAAT ACGCTTCTTG GCCTTAGAAA TATAAATATT GAAGATTTGG ATGTAAAGTT GAAAAATATA CCAAGTTTTG AGCTTTTACC AAACATAAAC CAAGCCGTAG ATAGACTTGT AAAAGCCATA AAATCTAAAG AAAGGATACT GCTTTACGGA GATTACGATG TGGACGGGGT TACTTCTACT ACCATCATGT ACGATTTTTT AAAGCAAATA GGTGCCAACG TAGTACCGGT GCTTCCAAAC AGAAACTCCG GCTACGGGCT TTCAAAGGAG ATTATAGATT TATTCTCAAA GTATTCTAAC TTAGTGCTTA CATTAGACAA CGGTACCACA GCCGTTCATG AGACAAAATA TGCAAAAGAA AAATACAATA TGGATTTTAT CATTTTAGAC CATCATATGA TAAATCATGG AGAACATTTG CCTGAGGCTA TATTGGTAAA TCCAAACTTA GAAAAAGACA ACAAACTAAA AGGCCTATGC ACAGCTGGGC TTTCCTTTTA TATGGTGGGG GCTTTAAGAA GGGCTTTGGG TGTAGATTTT GATATAAAAA AATATCTTGA TTTGGTGGCA GTAGGTACTG TAGCAGATGT GATGCCGATA AATTCATTAA ACAGAGTCCT CATATCTAAA GGTCTTGAGC TTATAAACAA GATAAAAGAT ATGCCTTGGG ATATGGCTAC AGATTTTGGA AAAGCTGGTA TGAAAGCCCT TATAAACTAC ATATCAAAAA CCCAAAACGG AAATCAAAAG ATAATCACCG CCAAAGATAT AGGATTTTCA ATAGCCCCAA GAATAAACGC CGCAGGTCGC ATAAGAAAAC CTCAAATAGC TTTGAAGCTT TTGGCGGAAA AAAACTATGA GAAAGCTAGA ATCTTAGCTG AAGACTTAAA CAAGATAAAC CAAGATAGAA GAAGAATATC AAACGAGATG TTTAAAGAGG CTTATAGCCT TGCCTCTCAG TCCAACGATG ATTTTGTGAT ACTTGGAAAA CAAACGTGGC ATCATGGGGT TCTTGGAATT GTGGCTGGAA GACTTTCTAA CAAGCTTAAA AAACCAACAG GTATATTTCA CATCAACAAC ACTCACGCGG TTGGCTCTAT AAGATCTGTG GAAGGTCTTG ATGTTCATAA GCTTTTATCA AATTTAAGCT ATATGTTTGA TAAATGGGGA GGTCATGCTG GAGCAGCTGG GGTTACCATT AAAAAAGAAT ATTTTGATGC TTTTAGACAA AAGATAAACG ATTTATTAAA GAGAGAATCC TTTGAAGTGG ATAGGGTTTT AGAGGTGGAT ATGGAACTTC CCCTAAGAAG CGTTGATAAA CGTATTGGAG AAATAATAGA GAAGCTATCT CCATATGGTG AACTAAACCC AGAACCGATT TTTATATCTC AAGATATCAC CGTATCTTCT ATATCAAGCA AAGGCGTAGG CGTAAGGGTG AAAACCTTAG ACAAAGATAA AGAGGTAGAG CTAAGCTGTT TTGAAGAGGA GCTTTTTGTA AAACTAAGAC CTGGTCAACG TTTAAAAGCC ATATACAACA TAGATTCTTA TGGAATAAAC ATGATAGATG TGGTATTTTG TTGA
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Protein sequence | MISALGRHVV VKSQIQSLDD SADLYSLVFN TLLGLRNINI EDLDVKLKNI PSFELLPNIN QAVDRLVKAI KSKERILLYG DYDVDGVTST TIMYDFLKQI GANVVPVLPN RNSGYGLSKE IIDLFSKYSN LVLTLDNGTT AVHETKYAKE KYNMDFIILD HHMINHGEHL PEAILVNPNL EKDNKLKGLC TAGLSFYMVG ALRRALGVDF DIKKYLDLVA VGTVADVMPI NSLNRVLISK GLELINKIKD MPWDMATDFG KAGMKALINY ISKTQNGNQK IITAKDIGFS IAPRINAAGR IRKPQIALKL LAEKNYEKAR ILAEDLNKIN QDRRRISNEM FKEAYSLASQ SNDDFVILGK QTWHHGVLGI VAGRLSNKLK KPTGIFHINN THAVGSIRSV EGLDVHKLLS NLSYMFDKWG GHAGAAGVTI KKEYFDAFRQ KINDLLKRES FEVDRVLEVD MELPLRSVDK RIGEIIEKLS PYGELNPEPI FISQDITVSS ISSKGVGVRV KTLDKDKEVE LSCFEEELFV KLRPGQRLKA IYNIDSYGIN MIDVVFC
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