| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1244 |
|---|
| Symbol | |
|---|
| ID | 6744061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1153379 |
|---|
| End bp | 1154311 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642751053 |
|---|
| Product | dihydroorotate dehydrogenase 1B |
|---|
| Protein accession | YP_002121907 |
|---|
| Protein GI | 195953617 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGT TAGGGATAGA GCTTTTTGGT ATAAAGTTTA AAAACCCTGT ATGGGTGGCT
TCTGGGACTT TTGGATACGG TGTTGAAGGA GCCGATATAT ACGATATATC AAAACTGGGG
GCAGTGGTAA CAAAAGGACT TTCTTTAAGG CCAAGAGAAG GAAACCCAAT GCCAAGGATT
GCAGAAACCC CTTGCGGTAT GCTAAACTCA ATAGGACTTC AAAATCCTGG TGTTGAGGCT
TTTATTAAAA AAATATATCC AGTTATAAAA GATATAGATA CGCATTTTAT AGCAAACGTA
TTTGGAGAAA CCGAAGAAGA GTATATAGAG GTAATAAGGA TTTTGGAAGA TGTGCCAAAG
ATCTCTGCCT ACGAGTTAAA TGTATCCTGC CCAAACGTAA AAAAGGGTGG TGTGGTCTTT
GGTCAAGACC CAGTAGTTTT AAGATCTTTG ATAGAAAAGA TAAAATCTTT TGCCAAAAAA
CCACTTCTTG TAAAGCTCTC TCCAAACGTG ACAGATATCA CAGAATTTGC AAAAATATGC
ATAGAGGCAA AAGCCGACGG GATTGTGCTT ATAAATACGC TTATAGGCAT GAAAATAGAT
ATATACAACG AAAGGCCTTT CCTTGCCACA AAAACCGGTG GGCTTTCTGG TCCTGCCATA
CTTCCAATAG CCGTTAGGAT GATATGGCAA ACCTATGAAA AATACGGCAA GGCTATACCT
ATAATAGGCG TTGGTGGGAT TAGTACATAT GTAGACGCTT TAGAGCATAT ATTGGCAGGG
GCTAGCGCTG TGCAAATTGG TACTGCAAAC TTTTATAAGC CTTTGAGCCC TTTGGATGTG
ATAGAAGGTA TAAAAAATCA TTTGGATGCT AAAAACCTAA AACATTTCAA AGAACTAATT
GGAAGAGCCC ATAGGCTTGA TATAAAGCAA TGA
|
|---|
| Protein sequence | MDKLGIELFG IKFKNPVWVA SGTFGYGVEG ADIYDISKLG AVVTKGLSLR PREGNPMPRI
AETPCGMLNS IGLQNPGVEA FIKKIYPVIK DIDTHFIANV FGETEEEYIE VIRILEDVPK
ISAYELNVSC PNVKKGGVVF GQDPVVLRSL IEKIKSFAKK PLLVKLSPNV TDITEFAKIC
IEAKADGIVL INTLIGMKID IYNERPFLAT KTGGLSGPAI LPIAVRMIWQ TYEKYGKAIP
IIGVGGISTY VDALEHILAG ASAVQIGTAN FYKPLSPLDV IEGIKNHLDA KNLKHFKELI
GRAHRLDIKQ
|
|---|
| |