Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1108 |
Symbol | |
ID | 6743924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1025319 |
End bp | 1026137 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642750917 |
Product | Tetratricopeptide TPR_2 repeat protein |
Protein accession | YP_002121772 |
Protein GI | 195953482 |
COG category | [S] Function unknown |
COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.866947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA AGAAATTGTT TTTTGCAATA AGCGGGTTGG CGATTCTTCT TAGCTCTTGT GCAGAGCCGA CACAGCAAGG GCCAAATCCA ATAACTATGC TTCAGCAACA GTATCAATAT CAACAACAAG AAATCAACGA AATAAATAGA AGGCTAGATT CTTTGGATGA GTCTTTGGCA AAATTGAGGG TAAAGCTTGG GCTTTCTACA TACAACAATA TTACAAAAAA CCTTGGAGAA TCTGAGTCTC AAACCCCACC AGAATCTTCT GAAACACCGC CATCACCTTC AAACCTTAGC TCTTTACCAG CTATAACCCC TTCAAAAGGC ATAAAAAATC TATCAAGCAC CGTTACTATA ATAAATTCTA CAGCTCCTTC TGAAACTCAA AGTTCATCTT CCAATTTGCA AGCCCTCATC TCAAACACGC CTCAAAGCCC TCAAGAACTA TACGGAATGG CTTACACAGC TTATCAATCT GGAGATTATC AAAAAGCTAA GAGACTTTTC AAAGAGTTTA TATTGAAAAA CCCACATTCA AAACTTACAA ACAACGCATA CTACTGGTTA GGAATGGCTG AAAAAGCCAT GCATCATAAC AATGAAGCGT TGGCGATACT GCTATCTTTG ATAGATAAGT GTAAAAAAGG TGAATTACCC TCTTGTGATA AAGCGCCTTC GGCGTATTTT TCTGCGGCGA ACATATATAG AGAAATGGGA CAAAAATCAG CGGCTATAAA CTTATACAAG GAGCTTATAA AACTTTACCC AAATAGTATA GAAGCGGCTT TAGCAAGATC CGAATTAGAG ATTAAATGA
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Protein sequence | MKKKKLFFAI SGLAILLSSC AEPTQQGPNP ITMLQQQYQY QQQEINEINR RLDSLDESLA KLRVKLGLST YNNITKNLGE SESQTPPESS ETPPSPSNLS SLPAITPSKG IKNLSSTVTI INSTAPSETQ SSSSNLQALI SNTPQSPQEL YGMAYTAYQS GDYQKAKRLF KEFILKNPHS KLTNNAYYWL GMAEKAMHHN NEALAILLSL IDKCKKGELP SCDKAPSAYF SAANIYREMG QKSAAINLYK ELIKLYPNSI EAALARSELE IK
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