| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1067 |
|---|
| Symbol | |
|---|
| ID | 6743882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 995503 |
|---|
| End bp | 996453 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642750875 |
|---|
| Product | glycosyl transferase family 9 |
|---|
| Protein accession | YP_002121731 |
|---|
| Protein GI | 195953441 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000716573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGTAC TTGTTTGGCA AACAGCTTAC TTAGGGGATG TGGTGCTGGC TACATCCCTT
TTGCAAAATG CTGTTGAGAT TTTCGGAGAA CACAACGTAG GTTTTGTAGG AAGGCCTTTC
ATAAAAGATA TTTTCTATGG TTACCCTATA GAGCTTTACC CTTACGATAG GTCGTTGAAA
GACTCTTTTG ATATCATAAA AGCCATAAAA GGTTACGATG CTGTTTTGTC TTTACATGTA
TCTTTTAGAA GCGCCTTGAT ATTATATTTA TCTGGTATTA AAAAGCGGAT AGGTTTTGAT
AGATCAGAAG GAAAATTTTT ATATACAGAC CTTATACCTT ACCAAGAAAA AGGTATTCAC
GAGATAGAAA GAAATATAAA ACTTTTGGAG CTTTTGATAT CAAAAAAACT AAACCCAAAA
CCACCAAAGC TATATATAGA AGAAGATCTA AAAGAAGCTG TGAAAAGAAA GTTCAATTTA
CCACTTTCTT TTATAGCAAT ATCTCCTACG TCAAATTTTT TCTTAAAAAC CTGGAAACAA
GAGCACTTTG TAAAGCTCTC AAAATCTCTT GATAAACCTG TAGTTATATT ATCTGATAAA
CGTTTAGAGG CTTTTGACAA TATAAAAAAT GTTTTAAACT TATCAGGTTT AACTTCTTTG
AAAGAGTTTT TAGCTACTTC GAGTCTTTCT TCTCTTATGA TTGCAAACGA TTCTTCTTCT
GTTCATATAG CAAACGCCTT TGGTATAAAA GCTATTTCAA TATATTGTGC TACTTCAGCC
TCTTATGGGT TTTATCCTAT AAATGGGTTT TATTTAGAAC CTAAGTTATA TTGTCACCCT
TGTTCTATAA ATCCTAAAAG CTGTAAAACA AAAACCTATC AATGTCTTGA TTTTGTAAAA
CCAGAGGATG TGTTAGAGAA AGTGAAGACT ATTCATGATT TATTCATTTA G
|
|---|
| Protein sequence | MKVLVWQTAY LGDVVLATSL LQNAVEIFGE HNVGFVGRPF IKDIFYGYPI ELYPYDRSLK
DSFDIIKAIK GYDAVLSLHV SFRSALILYL SGIKKRIGFD RSEGKFLYTD LIPYQEKGIH
EIERNIKLLE LLISKKLNPK PPKLYIEEDL KEAVKRKFNL PLSFIAISPT SNFFLKTWKQ
EHFVKLSKSL DKPVVILSDK RLEAFDNIKN VLNLSGLTSL KEFLATSSLS SLMIANDSSS
VHIANAFGIK AISIYCATSA SYGFYPINGF YLEPKLYCHP CSINPKSCKT KTYQCLDFVK
PEDVLEKVKT IHDLFI
|
|---|
| |