| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1033 |
|---|
| Symbol | |
|---|
| ID | 6743848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 967714 |
|---|
| End bp | 968427 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642750841 |
|---|
| Product | Lytic transglycosylase catalytic |
|---|
| Protein accession | YP_002121697 |
|---|
| Protein GI | 195953407 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATTG AGGATTTAAC AAATTTTATA AAAGGTGGTA ATGAAGAGAA AATTGTTAAA
AAGATAAAAG AAGATGTGCC TTCTTTTGAA GATACGTTAA AATCTGAAAA CTCTAAAAAA
ACCGAATCAA AGTTTATTCC CTTTACAAAA GACGGTTTTA TGTCAGACAA TTCCTCTTTG
GTGGAAATGT TTAAGTTTTT TGATATTGTT GACACTACCC AAGATCCTCC TACAGACAAT
GAAAACCATA ACAACTTAAC AAATCTTATC ACAGATAACA CAAAAGAAGC TATAGAATAT
AGTTTTGATA GCTTGCCAAA AGACCTAAAA AATCAAATAG GACAAGCCGC AGATAAAGCT
TCTTTCAAAT ACCATATTCC CAAAGAACTT ATATATGCTA TTATAGATCA AGAATCTTCT
TTTAATCCTT ATTCTGTAAA TCACAACAAA GATGGTACCA CAGATAGGGG ACTAATGCAG
GTAAACTACG ATCACAATAT AGATATAATG AAAGAGCTAA ATATAAAAGA TAAAAACCAA
CTGTTTGATA TAGACACCAA TATAGAAGCT GGCACAGCCA TACTGGCTAG AGATTTTCAA
AAGTATGGAA ATTGGCCTAC CGCTATAAAA GCTTACAATG GTATAAACTC AGATAACTGG
GGCTATGTCA AATCTGTGTT GTCAAAAATT AAGAAATACC AAAACGTTAC ATAA
|
|---|
| Protein sequence | MRIEDLTNFI KGGNEEKIVK KIKEDVPSFE DTLKSENSKK TESKFIPFTK DGFMSDNSSL
VEMFKFFDIV DTTQDPPTDN ENHNNLTNLI TDNTKEAIEY SFDSLPKDLK NQIGQAADKA
SFKYHIPKEL IYAIIDQESS FNPYSVNHNK DGTTDRGLMQ VNYDHNIDIM KELNIKDKNQ
LFDIDTNIEA GTAILARDFQ KYGNWPTAIK AYNGINSDNW GYVKSVLSKI KKYQNVT
|
|---|
| |