| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0928 |
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| Symbol | |
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| ID | 6743740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 875405 |
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| End bp | 876340 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750734 |
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| Product | putative RNA polymerase, sigma 70 family subunit |
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| Protein accession | YP_002121593 |
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| Protein GI | 195953303 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000210299 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTCTG ATAGTGAACA AGAGATTATC AATCAATATA TGAAGCGAGT CTCTAGTGTA
AAGCTTTTAA CGCCTCAAGA AGAAAAAGAA TTTGCCAAAA GAGCGAAAGC TGGTGATAAG
GAAGCCTTAA AAGCTTTAGT AGAAGCAAAC CTAAGATTTG TGGTAAGCGT AGCAAAGCAG
TATATGGGGT ATGGCATACC TTTGTCTGAG TTAATAGCGG CTGGAAACTT GGGTCTTTTA
GAAGCGGCTA CGAGGTTTGA TCCAGATAAA AACGTAAAAT TTATATCTTA TGCTGTATGG
TGGGTAAGAC AAGCTATAAT GCAAGCTTTG TCTCAACAAA CCGGAGCTGT GAGAATACCT
GTAAAGCACT CTCATCTTAT AAGTGCAGTG GGTCTTGCTT ACAATGAGCT TTTAAAAGAG
CTTGAAAGAG AACCTACTTA TAAAGAAATA GCAGATTATA TAAACAAAAA GAATATTATT
AGAGAGTTTA AAAAAGAAAC CGGTTTTGCG CCTACGGAAG AGGAGCTAGA GCAATCGATG
ACCCAAGAGC ATAAATATAC CGTAACTGAA GAGGATGTAA AAAAATGTCT TCAGATATGT
AAAACACCTC TTTCTTTGGA TACGCCTGTG GGGGATAATC CAGATACTCT TTTTGTTGAC
CTTCTTAGCA TATCTGACAC AGACGAGATA GAAGAGGGTG TTATAAAAGA TGTATTGGAA
AAGGAATTGC ACGATATAAT CAGTAAACTT CCGGAGAAGG AAAGAAAAGT CCTTGAGCTA
AGGTATGGTC TAAACGGCAA TGAACCTCTA ACGCTGAGAG AGATAGGAGA TGCTTTGGGT
ATTTCAAGGG AAAGGGTAAG GCAGTTAGAA ACAAGAGCTA TTAAAAAACT AAGAAGTTTT
GCTTTAAAAA GACATTTAAA AGATTTCTTA AGTTAG
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| Protein sequence | MYSDSEQEII NQYMKRVSSV KLLTPQEEKE FAKRAKAGDK EALKALVEAN LRFVVSVAKQ
YMGYGIPLSE LIAAGNLGLL EAATRFDPDK NVKFISYAVW WVRQAIMQAL SQQTGAVRIP
VKHSHLISAV GLAYNELLKE LEREPTYKEI ADYINKKNII REFKKETGFA PTEEELEQSM
TQEHKYTVTE EDVKKCLQIC KTPLSLDTPV GDNPDTLFVD LLSISDTDEI EEGVIKDVLE
KELHDIISKL PEKERKVLEL RYGLNGNEPL TLREIGDALG ISRERVRQLE TRAIKKLRSF
ALKRHLKDFL S
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