| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0927 |
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| Symbol | |
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| ID | 6743739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 874553 |
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| End bp | 875404 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642750733 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_002121592 |
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| Protein GI | 195953302 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000000224094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGTT TTTATATAGG CTATAAGCCG GTTGGTATAT CATCTTCAAA ATTTGTGCTT
GATATATCTA AAAGCCTAAA TACAAAAGCA GGACATACTG GTACGCTTGA TTTAGAAGCA
GAAGGTATAA TGATAATAGC TCTTGGGCAA GCCACCAAGT ATACGCAATA CTTCAATGTG
CTCCCAAAAA TTTACGAGAC AAAAGGTATG CTTGGTATAA AAACAGACAC CCAGGATATC
TCAGGAAATG TTATTCAGAA AATAGAAGAT GTAAATATAA CCTGTGAAGA GCTAAAAAGC
ACCATTGAAA AATTCAAAGG CAAAATAACC CAAATACCCC CCATCTACTC CGCTAAAAAG
ATAAACGGTA AAAAAGCTTA CAAATTAGCA AGAAAAAACC AAGTCCAAAG CATAGAGCTA
AAACCTATAA CGGTGAATGT TTACAGTATT GAGCTTTTAG AATGCAACAT ACCTGAGTTT
TATACAAAAG CTGTTGTTTC AACGGGGACT TACATAAGGA CGTTGATAAA CGATATAGGA
GATACTCTAA AAGTGGGTGC TACTACGCTT ATTATAAAGC GTACCGCCGT AGGTAAATTT
GGCAATGAAA GCGTAGGTAA GATTTATTCT ATTGAAGATG GTCTTTATTT TATACCGTCT
TTACTATTAA AAGATGATAT CGTTAGGCGT TTAAAGCATG GTAAAGTAAT AAAATATGAA
GCAAAAGACG GCGTATATAA ACTTTTATCG GAAGATGGAA TGTTTCACGG CGTTGTAGAG
GTAAAAGATA ATGTTCTAAA AGCTTTAAGA ATGCAAAGCC AAGAAGATAA AAATCATATT
GACAAAATAT AA
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| Protein sequence | MDGFYIGYKP VGISSSKFVL DISKSLNTKA GHTGTLDLEA EGIMIIALGQ ATKYTQYFNV
LPKIYETKGM LGIKTDTQDI SGNVIQKIED VNITCEELKS TIEKFKGKIT QIPPIYSAKK
INGKKAYKLA RKNQVQSIEL KPITVNVYSI ELLECNIPEF YTKAVVSTGT YIRTLINDIG
DTLKVGATTL IIKRTAVGKF GNESVGKIYS IEDGLYFIPS LLLKDDIVRR LKHGKVIKYE
AKDGVYKLLS EDGMFHGVVE VKDNVLKALR MQSQEDKNHI DKI
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