Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0856 |
Symbol | |
ID | 6743667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 806626 |
End bp | 807555 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642750662 |
Product | histone deacetylase superfamily |
Protein accession | YP_002121521 |
Protein GI | 195953231 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0895485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG CTTTGTATTA TGATGATATA TATCTTCTTC ATGACGAACC AAAACATCCA GAAAATGCCA ACAGATTGAA AGTAGCTTTA GAATATATTT ATAAATCTGA CATAAAAAAT ATTTTATCTT TTGAAAAGCC TAGAAAAGCT ACGGTAGAAG AAGTATCGAA AATACATGAC ACTTACTATA TACAGGAAAT ATACGAATTT TGCAAAAAAG GTGGTGGGTA TTTAGACCCA GATACTTACG CTTATCAACA TAGCTACGAT GCTGCAATGA TGGTAGCCGG TGCTATTTTA AAGGCTATAG AAGATATAAA AGACGCTAAA CAAGAAGCTG CTTTTTGCTT GGTAAGACCA CCTGGTCATC ACGCTGAATA TGCTAAGGCG ATGGGTTTTT GTATTTTTAA CAACGTAGCC ATAGGCGCAA GAAAAGCCCA AAACCTTGGA TATAAGAAGG TTTATATAGC AGATTTTGAC GTGCATCATC CAAACGGTAC ACAGCATACT TTTTACGAGG ACGGTTCTGT GTTTTTGTTC TCTACCCATT GCTACCCTTT TTATCCAGGC ACCGGTGCAG CAGACGAGAG AGGTTTTGGA GAAGGTTTTG GCACCACGTT GAATGTGCCG CTAAGAGCTG GTACTGGCGA TGAAACTTAT ATTGAGGTGT ACCAGACAAA ATTTTTGGGA AGTTTTAGAG CTTTTAAACC AGACATACTA TTGATAAGTG CCGGGTACGA TTTACACGAA GATGACCCTC TTGGTCCTAT GAGAGTTACT TCGCAAAGTA TAAAAGAGAT TACCAGTATA CTCATAGATG CAGCAAAGGA GCTTAATATA CCAGTTGTAG CTACGTTAGA GGGGGGATAC AACTACAATG CTACTGCCCA AGGAATATTA GACACGATAT TCAATATGGT AAATGCATAA
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Protein sequence | MKTALYYDDI YLLHDEPKHP ENANRLKVAL EYIYKSDIKN ILSFEKPRKA TVEEVSKIHD TYYIQEIYEF CKKGGGYLDP DTYAYQHSYD AAMMVAGAIL KAIEDIKDAK QEAAFCLVRP PGHHAEYAKA MGFCIFNNVA IGARKAQNLG YKKVYIADFD VHHPNGTQHT FYEDGSVFLF STHCYPFYPG TGAADERGFG EGFGTTLNVP LRAGTGDETY IEVYQTKFLG SFRAFKPDIL LISAGYDLHE DDPLGPMRVT SQSIKEITSI LIDAAKELNI PVVATLEGGY NYNATAQGIL DTIFNMVNA
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