Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0819 |
Symbol | |
ID | 6743625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 760336 |
End bp | 762717 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642750620 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002121484 |
Protein GI | 195953194 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00766455 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAG AAGCTTTTAA GCATATAAAA CATTACTTAG AAAATATTAA CAAAAAATAT GGTCTTGTAT TTTCTTGGTT AGGCTTAAGA AAAAGCGATT ATACGGTTTT CCCGCTAATG TCGTCAAAAG AAAATGAAGA CTATTTAAAA TATGTAAAGT TAAGATGGGA TGATTCACCA TATGGTAATG CACCTGTACC TGTGGGAATG GCAATAAAAA CGGCTAAGAT TCAATATTCA AATGATATGC TAAATGACAA AAGATTTGAG CCAGTTTATG AGCTTTTAAA GAAGAAAAAT TTTTTGTCAA TGATTACTGT TCCTTTGCTT AAAGACGATA ACAAAGTGTT TGGGGTTTTT GCGGGTTATT CTGATAAAAT TAATTTTTTT AACGATGAAA TTATACATAG CATATCGAGG GATGTTGAAA ATATAAATCA AGAGCTTGTT AAAATTTATA AAGATGAAAT TCAAATAGAG GAAAAAATAA ATGAATACCT TAGTATTTTA TACGACATGA TAACATATAT AAACAAAGGC ACTGCATCAA ATATAGACCC GAAATATTTA ACCGTAGATG TTTTAAACGA TTTAGATAAG CTTTTAAATG CGGATGGCTC TGAGTTTATA ATATATAATA AAACGGACAA CAAAGTTGAA ATGTGTGTAG CATCTGATTT ATTTTTAGAA AATTTTTCTA TACCATCCTT TGACTTAGAA ATGTTTGGAG GTTTGTCACC GTTTGTAAAA CACTATATGG AGATAGAGCA TGCGGCAAAC ATAGATTATG AGCATGATCC TTACGCTTCA AAATGGTATA TAGAAAAAGG GTTGAAATTT ATAAATTCTA CATCTATAAA TACATATATA TACAATAAAG ACACTGCTTG CATGCTTCTT TTTGCAAGAA AAAATGAAAT TCTTATATCA GAAATAGAAT TAAACATACT AAAGCTTATC AATCAAGCTT TATTCAGCAT TTTTGTGGCA AGAAAATATC TTACAGATAT AGATTCTTTA CACATTCATC TTGAAGAAAT TGCTACAAAA GATCCATTGA CAGGATTTTA CAACAAGGAT ATGTTTGATA TGTTCTTAGA AAATGAAGTA AAAAAATCAG CCGTTAGGAT GTTGCCAAAT GCTTTTAGTT ATATATTGAT AGATATAGAT AACTTTAAAT ATATAAACGA TGCCTACGGT TATTCAGCTG GGGATATGGT CATAAAAGAA CTATCCAATA TATTAAAATC TAGCACTAGA GCTCCAGATA TATTGGCTAG GATAGGCGGA GATGAGTTTG GAATAATTGC ACCAGATACA AAAGTACAAT CTGCAAAGGT GATAATGGAG AGAATAAACG AGAGACTAAG TTCTCAGCCG ATAATATTAG AAGATAAAAA AATATATATA AGTTTATCCG TAGGTATATC AACGTGCTTT GAAAAAGAAG GGCAAAGCTT GCTAATATCT GGTTTCTCAG ATGATGATAA CACTCAAAAT AAGCGCTTAT CTAAAGCGTT TTGTTCAAAA GAAGAGGTTA AGATGCTTGC CGAAGAAGCG TTAAGAAAAG CAAAGAAAAG TGGGAAGTCT AGTGTGGTTA TAGCCTCTTT TGAAGATAAT GATATAGAAT ATATTTCAAA ATACGAACTT ATAAACAATG CTATAAACGG AAATTTAATA AAACCGGCGT TTCAGCCAAT CTTTGATCTT GAGGATAAAA AAATAATAGG TTTTGAAGCT CTTTGTAGGA TAGAGATAAA TGACAATATA ATATATCCAG ATCAGTTTAT AGAAGAGGCT GAAGATTTGG GGCTTATAAA TAAAATAGAT CTACTGATGA TAAGAAAAGC TTGTGAGAGA ATATCAGCGT TAAATAAAAA AATTAATTCA CAAGATGGTT TAAGGCTTTT TGTAAACATA AGCGCGAAGG CTTTTAAAGA TAGAAGATTT TTTCAGAATG TAGTTGATAT AGCAAAAGAG TACGGTATGC AAAATAAGCT ATACATAGAA ATTACAGAAA GGGAATCTCT TTCTAATTTG GAAAAATTTG AGGAGATAGA AGAATTTTTA AAATATTATG GTATCCATTT TGTAATAGAT GATTTTGGAA GTGGATATTC TTCATTTTTA TATCTGAAGT TTATAAAAAC GGAGATTCTA AAAATAGATG GGGCTTTTGT TAAAAACATA GTAAAAAACG AAAGGGATGT GGCGATAGTG AGTGGTATAA ATACAATTGC TAAACATCTT AATACAAAAA CGTTGGCAGA GTTTATAGAA AATGAGGAAA CTCTTGATGA ACTTGTGAAG ATAGGAGTAA ATTACGGTCA AGGGTATTAT CTTGGTAAGC CAACTTTTGA TTTGGAGAAA TTCTTTCAAT AA
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Protein sequence | MKVEAFKHIK HYLENINKKY GLVFSWLGLR KSDYTVFPLM SSKENEDYLK YVKLRWDDSP YGNAPVPVGM AIKTAKIQYS NDMLNDKRFE PVYELLKKKN FLSMITVPLL KDDNKVFGVF AGYSDKINFF NDEIIHSISR DVENINQELV KIYKDEIQIE EKINEYLSIL YDMITYINKG TASNIDPKYL TVDVLNDLDK LLNADGSEFI IYNKTDNKVE MCVASDLFLE NFSIPSFDLE MFGGLSPFVK HYMEIEHAAN IDYEHDPYAS KWYIEKGLKF INSTSINTYI YNKDTACMLL FARKNEILIS EIELNILKLI NQALFSIFVA RKYLTDIDSL HIHLEEIATK DPLTGFYNKD MFDMFLENEV KKSAVRMLPN AFSYILIDID NFKYINDAYG YSAGDMVIKE LSNILKSSTR APDILARIGG DEFGIIAPDT KVQSAKVIME RINERLSSQP IILEDKKIYI SLSVGISTCF EKEGQSLLIS GFSDDDNTQN KRLSKAFCSK EEVKMLAEEA LRKAKKSGKS SVVIASFEDN DIEYISKYEL INNAINGNLI KPAFQPIFDL EDKKIIGFEA LCRIEINDNI IYPDQFIEEA EDLGLINKID LLMIRKACER ISALNKKINS QDGLRLFVNI SAKAFKDRRF FQNVVDIAKE YGMQNKLYIE ITERESLSNL EKFEEIEEFL KYYGIHFVID DFGSGYSSFL YLKFIKTEIL KIDGAFVKNI VKNERDVAIV SGINTIAKHL NTKTLAEFIE NEETLDELVK IGVNYGQGYY LGKPTFDLEK FFQ
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