| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0705 |
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| Symbol | |
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| ID | 6743509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 640329 |
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| End bp | 642728 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750504 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002121370 |
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| Protein GI | 195953080 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000765865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTACCA AAAAGTTAAA AACTATACTG CTTAGCTTAG CTGTTTTTAG CGGTGGAGTA
TCTTTTGCTC AATCTAATTC AGCTCCAGTT TATAACATAG GGCAGATCAA CGTAGGAGCT
CAACAAGCAT CTTCTAAACA GAAGAAAATT GAAAAAAGAT ATCATAGAGC TACCTTAAAA
CTAAAAGATA AAACGATATT CAAATCTGCG CAAACTATAA AGGTTATAAA AAAAGACCAA
CTTAAAGTAG CTGGACCTAC TGGTAGCGCT TCCCAAGTGT TATCTTACGC ACCAGGTGTT
ACTATAAGTA GTTTTGGAGA AAATGGCTCT AGGAAATTTT CCATAGTTTT AAACGGCATA
AGGCAAGGAT GGGGCGGTTT TACTGGGGCC ACGGGTATAG ACAACGGATC TTTAGGAATC
ACTTTTGATG GTGTTCCACT AGTCAACCCT TCAACGGGCT TATGGCAATC AAATCAAATA
CCGCAATTAG ATCTAATCCA AGGTATAAGG GTTATCTATG GGCCAGGTAA TCCAGAATCT
AGATGGTACA ACGATTTAGG AGGACAGATA CAGTTTATAC CACTACAACC ATCAAAGTAT
ATGGGTGGTT TCTTTGATTT ATCGTACGGA AGCTTTAACT CAAGGAATTT ATTTGTAGCT
TTTAACACTG GTGATATTAA AGGTTGGAGA ACAGTTGTAG CAGCAGGCTG GGGAGCTGAT
AACAGCTATG TAACCTCTGT GGACGGATTT AGATATCCAG GTCACAACTA CGCTTATTAC
ATCAAAACTA AAAAAGTTTT TGCAGATGGA GACGGCGATT TTTCTATAGG TGCTTACGCA
GCACAGTCTT ACTACTGGAG AAACCCACCA ATACCAGTAT CTCCACAGCA AGGTCTTACA
GCAGATGGAA CACCAAACAC ACCTCTTTTA AGTCAAAGCA CCACTGGTTT TTATAGTGCA
CCTGATTTTT CAGTGCTTCA CAAGTTAGAC CAAAACGGCT TAGATCTTGT ATATTCAAAA
TTAAACCTAA ATTTCGATAA AAATACAAAA TTTCACAACA TGATATGGTT TAGATATGGC
TTTAGAAGAC ATAATCATTA TACTGGTTAT CCTCTTGGTT CTAATCCAGG AAATCTATAT
GAGTATAATA ATCCATACGA TAAAGTGTTT GGCGATAAAC TATGGTTTGA ACTAAACAAC
ATATACCATA ACAATATAGC TTTTGGTGGA TACTATTTAG TAAGTAATTA CAACTCAAGA
AACGCTTTTT GGAATCCTTC GGTAGAACTA GCACCAGGTA TTTATGGAAG TCCCACTGTA
CCAAATGCAC ATTATAGAAG TAACTATTGG AACCAAACAG ATATAGCAAG CTTTGCAGAA
GATACTATAA AATTTTACAA GTTTACATTT ACTCCTGGTA TAAGATGGGT AGATTTTATA
ACAGATTATA ACAACGAAAC CTGCACAGAT TTTCCTTTAG CTTGCCAATT AAATCCTAAT
GGAAACCAAG CTCAATATCC TTCTACTCAC ACAAACTTTA CTAAATTAGA GCCTTCTTTT
GATGCAAATT ATGAAATTAT TGATGGTATA TCAGTATATG GAAACTATGC CGAGACGTAT
AAAGTGCCAG AAAACGGAGG TGGTGGAGGC CCATATCAAG CTGTGCCAGC TTCAGAACTA
CATCTAGAAA AATCACAGGA ATATCAAATA GGTTTTAAGG TGTTAAAACA AAACTTAAAG
TATGCCAATA AAATATTTGC AGGTGTCAAC TATTTTCATA TGATATTTTC AAATTTATTT
TATCCCATAT ACGACTCTAA TGGTAATTAT CTAGGAGACG GTGCTGGTAC ATCAGTTTAC
AAGGGTGTAA ATCTATTTGC AGATTATTAT CCTATAAAAC ACCTTTATCT ATGGACAAAC
GCCACTTTTG AGGATGCCAA ATTCCCAAAT TACACATACA CAAATGTTAA TGGTAATATT
ACATCCGCTA ATGATCTACC AGTTTCTTAT GTACCAGATA CTTTGTTTAA TTTAGGTGTA
AGCTATTCTT ATCTTATAAA TTATCTACAC GGCATAATAA CAAAGCCTTC TGTCTGGTTC
CAATACGTAG GCTCTCAATC TATGTTTAAC AACAACACCG GTCTTCCGGA TACTCAGAAA
ATGCCAAGTT ACAATACTTT GAATGCCTCT ATATCTTTTG ATATACTAAA CACCGCAAGA
AGCATTCCTT ATTTTAAAGA TATTCAGCTT ACTCTAACGG CTTTAAACAT AACAAACAAA
AAGTACAATG AATTTGAATA CATATCAAGC GGTTCATATT ACAGCGTTAA TGGAGGCTAT
GTACAAGCTT ATCCAGGAGC TCCATTTACA GTTTATGGCT CTATAAAAGC AGATTTTTAA
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| Protein sequence | MLTKKLKTIL LSLAVFSGGV SFAQSNSAPV YNIGQINVGA QQASSKQKKI EKRYHRATLK
LKDKTIFKSA QTIKVIKKDQ LKVAGPTGSA SQVLSYAPGV TISSFGENGS RKFSIVLNGI
RQGWGGFTGA TGIDNGSLGI TFDGVPLVNP STGLWQSNQI PQLDLIQGIR VIYGPGNPES
RWYNDLGGQI QFIPLQPSKY MGGFFDLSYG SFNSRNLFVA FNTGDIKGWR TVVAAGWGAD
NSYVTSVDGF RYPGHNYAYY IKTKKVFADG DGDFSIGAYA AQSYYWRNPP IPVSPQQGLT
ADGTPNTPLL SQSTTGFYSA PDFSVLHKLD QNGLDLVYSK LNLNFDKNTK FHNMIWFRYG
FRRHNHYTGY PLGSNPGNLY EYNNPYDKVF GDKLWFELNN IYHNNIAFGG YYLVSNYNSR
NAFWNPSVEL APGIYGSPTV PNAHYRSNYW NQTDIASFAE DTIKFYKFTF TPGIRWVDFI
TDYNNETCTD FPLACQLNPN GNQAQYPSTH TNFTKLEPSF DANYEIIDGI SVYGNYAETY
KVPENGGGGG PYQAVPASEL HLEKSQEYQI GFKVLKQNLK YANKIFAGVN YFHMIFSNLF
YPIYDSNGNY LGDGAGTSVY KGVNLFADYY PIKHLYLWTN ATFEDAKFPN YTYTNVNGNI
TSANDLPVSY VPDTLFNLGV SYSYLINYLH GIITKPSVWF QYVGSQSMFN NNTGLPDTQK
MPSYNTLNAS ISFDILNTAR SIPYFKDIQL TLTALNITNK KYNEFEYISS GSYYSVNGGY
VQAYPGAPFT VYGSIKADF
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