Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0563 |
Symbol | |
ID | 6743359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 499171 |
End bp | 501711 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642750354 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_002121228 |
Protein GI | 195952938 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAT TGAAAAAACT CAGCGTTTTT ATATTGCTAA TAGCGGGACT TGTGTCTGTC TTAGTAGCTG CAACTCTAAT TGTTACGATG AATACATACA TAAATGATGT TAAAAGCATA ACTATACAAC AATCCAAAGC TTTAGCTCAA CAAACGTTTA GTGATATGTT TCAAATAATG AAAACAGATT GGACTAAAGA ACAACTAGAA GATTTCCTTA AAAGTTTAGA AACTGCCCAT AAAAATTCTA ATACCAAAGT TTATATATAT AGAGGAAAGT TGGTAGATGA GTTATTTGGC AAAATAAATC AGAAAAAACC TAGCCCTTAT GTTGATAAGG TATTCAGAAC TGGAACATTC TATTCTTATA AGACCGACTC ATCTATCAGA TATTTTTATC CGTTAAAGGC TCAAAATGTA TGCTTAAGAT GCCACATAAA CGCTAAAGTT GGAGATACGC TAGGCGTTAT AGAAGTAAAA TCAAACATAT ATAATGCTAT ACACAAAATA GAAGTTGATA TTTTTAAAAG TTTATTCTTT TCTTTGGTTG TTATCGTTGC AGGAGCATCG TTTGTATCGT TTGTAATTAT GAAAGTAATT CATTCCAATG TAAATAAATT TAAAAAAGAA ATAGAAAACA TAGTTTCTGT AGATGACTTA ACCAAAATAA ATTTTAGTAA CATAGATTTT TTCTTCAATG AAATAAATGA GATAAGAGAT AGTATATCTA CTCTTGTAGA AAAATTAGCT AAGATTACTG TAGATAAGGA AATACTAGAA TTTGAGATAA AACTATTAGA GCAATTTATA ATTACATCAG AAGCTATAGC AAATTGGCAA GAATTTTTAG AAGGTCTATT AAAAGATATA GCTAAGCTTA TGGACTTTGT ATTTTTCTAC ACTATTTTCA GAACTGGAGA AGATAAGTTT GAATCGTTTA TTTTTTGGAG ATGTAAATGT GAAGGCTACA AGAAAAAAGT AGAAGAAGAT ATTTTGAAAT CCCTTAAAAC TTCTGGTATA TACGTGCCTG GTGCAAAGGT GGACTTTCAA CATATCTTGC TTGAAAATTC AATAGAAATA ATAGATTACG AGAAAATAGC TAAGTTGTCA AAGAATCTTA TACTAGAAAA GCCGTTGATA GGTGGTTCAG TAGGTATAGG TATAAGCTTT CAAGCTAGTG AAAACGAAGT TAAAAAGATG GCTGTAGAAG CTTTATTAGC AACGATTTTA AATATTATAG GTTCTATAAA AGCTATAAAC AAATATACTA AAGAGCTCGA ATATTATGCT ACTAGAGATC CGCTTACCAA TCTTTACAAT CAGAGAGTTT TCTGGGAGCT ATTAGAATAC GAAGTAGAGA GAGCCAAAAG GCATAATTAT AAATTTTCTT TGTTGGTTAT AGATTTTGAT AATTTCAAAT TAATTAATGA TGCATATGGT CATACGGTCG GTGATAATTT TTTAAGGAGA GTAGCTAAAA TAATAGAGGC CAATTTTAGA AACGAAGACA TAATAGCAAG ATATGGCGGA GACGAATTTG TAGTTATAAT GCCATATACT GATGCAGAAC AAGCTTTCAG CGCCTCTAAA AGACTATTAG ATGATATAGA TAAGTTTTCT ATGGAAGTAA ACAGTGGCAA ATATGCAAAA GCAACGATCT CTATAGGAGC TGCGGTGTAT CCAGACCATG CTAGAGCGGC AAAAGAGTTA TTTGTCTTAG CCGATAATCT GTTATATAAA ATGAAAGAAG AAGGCAAAAA CGGTATAAAA TTGCCGTCAG ACGAAGATCT GGGAGTGTTT GCGCAAGAAT TTGGGAAAAT CAGTTTCTTG CTAATGGAAA CGATAGATAA GAAAAAAGTA ATTCCATATT TTCAACCTAT AATAGATATA AAAACTATGA AACCATATGC ATATGAAGTA TTGATGAGGA TAGAAGATAA TGGAGAAATA TTATCAGCTT ACAAATTTAT AGAGATTGCC GAGACACTAG GATTAGTGTA TAAACTTGAT TATATTTTAA TAGAAAAAGC TATAGATACT ATAGTTAAAC ATAAATTGCC GGATAATATT AAAATATTCT TTAACCTTTC CCCTAAATCT CTAATAATAG GGGATTTCAT AGACAAAGTT AAAAGCATTC TAACACAATA TAGCTTTCCA TCTACCCGCA TAGTATTTGA AATTACAGAG AGAGATACAA TAAAAAATAT AGAAATAATA AAAAAATTTG TACAGGCTTT GAAGTTAGAA GGCTTCTCTT TCGCTATAGA TGATTTTGGT GCAGGTTTTG CTTCTTATGC ATATATCAAA CACTTTCCAA TAGACTTTGT AAAAATAGAT GGTGAAATAG TAAGAACGAT GACTTCTAAT AAAATAGATG AAGCATTCAT AAAAAGCACT GTAACATTAA CAAAAGCCTT AAATATGAAA ACTATTGCAG AATTCGTCGA AAATGAAGAG ACGTTACAGG CTCTAATTTC TGCTGGTATA GATTTTGTTC AAGGGTATTA TGTAGGCAAA CCTTCAAAGA ATTTATTATA A
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Protein sequence | MLKLKKLSVF ILLIAGLVSV LVAATLIVTM NTYINDVKSI TIQQSKALAQ QTFSDMFQIM KTDWTKEQLE DFLKSLETAH KNSNTKVYIY RGKLVDELFG KINQKKPSPY VDKVFRTGTF YSYKTDSSIR YFYPLKAQNV CLRCHINAKV GDTLGVIEVK SNIYNAIHKI EVDIFKSLFF SLVVIVAGAS FVSFVIMKVI HSNVNKFKKE IENIVSVDDL TKINFSNIDF FFNEINEIRD SISTLVEKLA KITVDKEILE FEIKLLEQFI ITSEAIANWQ EFLEGLLKDI AKLMDFVFFY TIFRTGEDKF ESFIFWRCKC EGYKKKVEED ILKSLKTSGI YVPGAKVDFQ HILLENSIEI IDYEKIAKLS KNLILEKPLI GGSVGIGISF QASENEVKKM AVEALLATIL NIIGSIKAIN KYTKELEYYA TRDPLTNLYN QRVFWELLEY EVERAKRHNY KFSLLVIDFD NFKLINDAYG HTVGDNFLRR VAKIIEANFR NEDIIARYGG DEFVVIMPYT DAEQAFSASK RLLDDIDKFS MEVNSGKYAK ATISIGAAVY PDHARAAKEL FVLADNLLYK MKEEGKNGIK LPSDEDLGVF AQEFGKISFL LMETIDKKKV IPYFQPIIDI KTMKPYAYEV LMRIEDNGEI LSAYKFIEIA ETLGLVYKLD YILIEKAIDT IVKHKLPDNI KIFFNLSPKS LIIGDFIDKV KSILTQYSFP STRIVFEITE RDTIKNIEII KKFVQALKLE GFSFAIDDFG AGFASYAYIK HFPIDFVKID GEIVRTMTSN KIDEAFIKST VTLTKALNMK TIAEFVENEE TLQALISAGI DFVQGYYVGK PSKNLL
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