Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0512 |
Symbol | |
ID | 6743308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 449916 |
End bp | 450614 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642750303 |
Product | Ribonuclease III |
Protein accession | YP_002121177 |
Protein GI | 195952887 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 68 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGTT TTGAGCTTTT AGAAGAAAAA ATAGGTTATA GATTTAAGGA TAAAAATTTA GTAAAGAAAG CTTTTACACA TATATCTTTT TCCAAAAGCT CAGAAAACTA CGAAGTATTA GAATTTTTAG GGGATGCTCT CGTTAATTTT ATGACCGTAA ATATATTGGT GGAGGCTTTT CCAAATAAAA AGGAAGGTGA GCTCTCTCAA TTGAAATCTT TTTTAATAAG CGAAGAGTTT TTAGCTAGTC TCGCCAAATC TCTAAACTTT GAAAAATATA TACTTATAAG TAAGGGTGAA GAGCTAAAGG GTTCTAACAA AAACCCTTCT ATTCTCTGCG ATGTGTTTGA AGCTTTTTGG GCTGCTATAT ACATAGACAG TGGATACGAT TGTAAGCTTA CAAAAAGTTT GTTTGAGCAT CATTTTAAAA GCCAAATACT TGAGATGGTA AACTCAAATA GCTTAAAGCA GGACTACAAA ACAGCTTTAC AGGAGATAAC TCAAAAAAAG TGGAAAGAAA GACCTATATA CAACGTCATA AGCGTAGAAG GTCCAGAGCA TAGGAAAACC TTTACAGTTG AATGTCTATT TAAAGATCTA AGAACCACAG GAAAAGGCAA CAGTAAAAAG TACGCGGAAC AAGAGGCAGC AAAAAATATG CTTCAGATAA TTCAAGATAA TGAAAAGAAA AAAACTTGA
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Protein sequence | MDSFELLEEK IGYRFKDKNL VKKAFTHISF SKSSENYEVL EFLGDALVNF MTVNILVEAF PNKKEGELSQ LKSFLISEEF LASLAKSLNF EKYILISKGE ELKGSNKNPS ILCDVFEAFW AAIYIDSGYD CKLTKSLFEH HFKSQILEMV NSNSLKQDYK TALQEITQKK WKERPIYNVI SVEGPEHRKT FTVECLFKDL RTTGKGNSKK YAEQEAAKNM LQIIQDNEKK KT
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