Gene HY04AAS1_0282 details

Gene Information

• Locus tag: HY04AAS1_0282
• Symbol: rpsE
• ID: 6743076
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 248703
• End bp: 249272
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 642750075
• Product: 30S ribosomal protein S5
• Protein accession: YP_002120950
• Protein GI: 195952660
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000000515856
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCGCTA AGGATTTAAA CCAAAGGATA GACGCTAAAA GGATAGAGCA AGGTATAACC 
ACTCTTGATG ATATTCAGTT TGAAGAGAGG CTTTTAGAAG CTGCCAGAAC TACCCGTGTT 
ACAAAAGGTG GGAAGCGTTT TTCTTTTAGC GCTTTGGTAG TGATAGGTGA TAAAAGAGGT 
TATGTAGGGT TTGGACTTGG TAAAGCTAGA GAAGTTCCAC TTTCTATAGC AAAAGCAATA 
GAAGATGCTA AAAAGAAAAC CATAAGAGTT CCTATAGTAA ATGGCACTAT ACCTCATGAC 
GTTGTTGGAG AGTATGGTTC TGCTCGCATT ATAGCTTTTC CAGCTAGAAG AGGCACCGGT 
GTTATAGCTG GCGGTGCTGC TAAGCCTATA TTTGAATTGG CGGGCTATAC GGATGTGCTT 
ACAAAGGTAG TGGGAAGTTC AAATCATCAT AACGTAGTAA GGGCTGTGTT TGATGCGCTT 
TTAAAATTAA GAGATATAGA TGCAATAGCT AAAGTAAAAG GTGCAACTGT AGAGGATTTG 
AGAGAAAGAT ACAACATATA CGCGAGGTGA 

 

Protein sequence

MGAKDLNQRI DAKRIEQGIT TLDDIQFEER LLEAARTTRV TKGGKRFSFS ALVVIGDKRG 
YVGFGLGKAR EVPLSIAKAI EDAKKKTIRV PIVNGTIPHD VVGEYGSARI IAFPARRGTG 
VIAGGAAKPI FELAGYTDVL TKVVGSSNHH NVVRAVFDAL LKLRDIDAIA KVKGATVEDL 
RERYNIYAR