Gene HY04AAS1_0147 details

Gene Information

• Locus tag: HY04AAS1_0147
• Symbol: clpX
• ID: 6742934
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: -
• Start bp: 131681
• End bp: 132880
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 642749935
• Product: ATP-dependent protease ATP-binding subunit ClpX
• Protein accession: YP_002120817
• Protein GI: 195952527
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1219] ATP-dependent protease Clp, ATPase subunit
• TIGRFAM ID: [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX)

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0162547
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAGCA AAAAAGAATA TTGTTCATTT TGCAACAAAT CATCCAAAGA TGTACCGTTG 
ATGATAGCGG GTCCAAATGG TATGAACATA TGTAGCGAAT GCGTAGAAAA AGCGATGGAT 
CTAATCAAGC AACATGATAA GGAAGAAGTT ACAAAAGAAG TAAGATCTAT ACCAAAACCA 
AAAGAGATAA AGAAAATTCT AGATGAGTTT ATCATAGGTC AAGATGAAGC TAAAAAAATT 
CTATCCGTGG CAGTTTATAA TCATTACAAA AGAATACTTA GAAAATCCGA TACAGATATA 
GAAAAGAGCA ATATACTCCT TATAGGACCT ACCGGAAGTG GCAAAACGCT TTTGGCAAAA 
ACATTGGCAA AAATTTTAAA CGTACCTTTT GCTATAGCAG ATGCCACTAC CCTTACAGAG 
GCAGGTTACG TCGGAGAAGA CGTAGAGAAC GTTTTAGTGA GACTCTTACA AAACTGTGAT 
TACAACATAG AAAAGGCTAA AAAAGGCATT ATATATATAG ATGAAATAGA TAAAATAGCT 
AAGAAATCTG GTCATAACCC CTCTATCACA AGGGATGTAT CGGGCGAAGG TGTGCAACAA 
GCTCTTTTAA AAATCATAGA AGGGACTATA GCAAACGTAC CACCTCAGGG TGGCAGAAAA 
CATCCACACC AAGAGTTCAT ACAGCTTGAT ACTACCAACA TACTGTTTAT ATGCGGTGGA 
GCTTTCGTAG GTTTAGAAGA TATAATAAAA AGAAGACTTG GTAAAAGCAC CGTGGGTTTT 
GAAACAGAAA TTTCAAAATA CAAAGAAGAA GGCAATATAC TATCACAGGT AGAACCCGAC 
GACCTTATCA ACTTTGGGCT TATACCTGAG TTTGTAGGAA GACTACCGGT TATAAGTGTT 
TTAAATGAAC TAACAGAAGA AGATTTGATA AGAATACTAA CTGAACCTAA AAATGCTGTT 
ATTAAACAGT ATAAAGAGCT TTTAAGAATG GAAGGTATAG GATTAGAGTT TACTGAGGGT 
GCTTTAAGAG AAATTGCAAA AGAGGCCATA AAAAGAAAGA CCGGTGCAAG AGGGCTAAGG 
GCTATAGTAG AAAAAATCAT GACTGACATT ATGTATGAAG CACCGTCTTT AGTAAACGTA 
GAAAAGATAG TTATAGATGA GAACAAAAAA CCAGTTTATA TGTATAAAAA AGCTGGTTAA 

 

Protein sequence

MASKKEYCSF CNKSSKDVPL MIAGPNGMNI CSECVEKAMD LIKQHDKEEV TKEVRSIPKP 
KEIKKILDEF IIGQDEAKKI LSVAVYNHYK RILRKSDTDI EKSNILLIGP TGSGKTLLAK 
TLAKILNVPF AIADATTLTE AGYVGEDVEN VLVRLLQNCD YNIEKAKKGI IYIDEIDKIA 
KKSGHNPSIT RDVSGEGVQQ ALLKIIEGTI ANVPPQGGRK HPHQEFIQLD TTNILFICGG 
AFVGLEDIIK RRLGKSTVGF ETEISKYKEE GNILSQVEPD DLINFGLIPE FVGRLPVISV 
LNELTEEDLI RILTEPKNAV IKQYKELLRM EGIGLEFTEG ALREIAKEAI KRKTGARGLR 
AIVEKIMTDI MYEAPSLVNV EKIVIDENKK PVYMYKKAG