Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0095 |
Symbol | |
ID | 6742878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 87770 |
End bp | 88906 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642749879 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_002120765 |
Protein GI | 195952475 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGGC TTGGTGTACT TGGTTCTACG GGGACTATTG GGAAAAATGC CCTTGATATT GTTAGATCAA ACAAAGATAA GATAGAGCTT ATAGGTATAG GTGCATATCG ATCATCCAAA GGGCTTTTAG AAGAGGTTAA AGAGTTTAGA CCTAAGTTTG TTTTTAGTGT AGAAACCCCT ACAAAAGACT GGATTGATGA GGTTTCAAAA TATTCTACAT ACCTTAACGA AGAAGAGGGA CTTCAGGCTA TTATAGAAAA CTCCGATAGG ATTTTAAACG CTATATCTGG GACCTCTGGC ATAAAAGCCA CTTACAGCAT ACTAAAAGCT AAAAAAATAC TTCTTGCTTC CAACAAGGAA TCAATCCTTT GTATGCCAAA CCTAATAAGA GAAAATATTG AGCTAGTGAT ACCGGTAGAC AGCGAACACA ATGCCGCTTT TGAGCTTCTT AAAAGCCACA AAACTGTGAA AAACCTTTAT ATAACAGCTT CAGGTGGTCC TTTCAGAGGG TATTCCAAAG AACAGCTAAA AACTGTAAGC AAAGAAGAGG CTCTTAAACA CCCAAATTGG AAGATGGGTC CAAAGATAAC CATAGACTCT GCAACACTTA TGAACAAAGG ATTTGAACTT GTAGAAGCCA GTGTATTGTT TAATATACCA CTTGAACGCA TAAAGATATT GATACATCCT CAAAGTATAG TGCATGCCAT AGTTGAACTT GAAAACGGCT CTTTTATAGC AAATATGTCG CTTCCAGATA TGAGGCTTCC TATTCAAAAC GCTATTTTTT ATCCAGAGAT GGTAAATTAT ACCTTCAATA GGTTAGATTT AACATCTATT TCTTGTCTTA CTTTTGAAAA GCCTAAAAGG GATTTGTTTA GGGCTATCGA TGTTTGTGAA TGGGTAGCCT CTATGGGAAA CCCTTATGTA TCTGTGCTTT TAGGAGCTGA TGATAAAGCT GTAGAGCTTT TTTTAGAAGG GAAAATTGGA TTTCTTGATA TACCAGTTTT GATAGAGAGC GTACTTTCTT CGGTGAATTT TCATATAGAA GAGAATCTTG AAGATATTTT AAGGGCTGTG GAGTTTGGTA AAAACAAATT ACTAGAATTA TCAAATCATA GGCTAACTAA CTGTTAA
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Protein sequence | MTRLGVLGST GTIGKNALDI VRSNKDKIEL IGIGAYRSSK GLLEEVKEFR PKFVFSVETP TKDWIDEVSK YSTYLNEEEG LQAIIENSDR ILNAISGTSG IKATYSILKA KKILLASNKE SILCMPNLIR ENIELVIPVD SEHNAAFELL KSHKTVKNLY ITASGGPFRG YSKEQLKTVS KEEALKHPNW KMGPKITIDS ATLMNKGFEL VEASVLFNIP LERIKILIHP QSIVHAIVEL ENGSFIANMS LPDMRLPIQN AIFYPEMVNY TFNRLDLTSI SCLTFEKPKR DLFRAIDVCE WVASMGNPYV SVLLGADDKA VELFLEGKIG FLDIPVLIES VLSSVNFHIE ENLEDILRAV EFGKNKLLEL SNHRLTNC
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