Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0086 |
Symbol | |
ID | 6742869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 79479 |
End bp | 80222 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642749870 |
Product | ABC transporter related |
Protein accession | YP_002120756 |
Protein GI | 195952466 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1124] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000503646 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAC TTAAAATAGA AAATCTTTAC AAATCTTTTG ACAAAAAACA TTATATATTA AGTAACATAA ATGTTGAAGT AACAAAAAAT CAATCTTTTT GTATAATAGG TCCTTCTGGC TCTGGCAAAT CAACCTTAGG AAAGTGTATA CTTAGGTTTA TAAAACCAGA TTTTGGGAAT ATATATTTTA AAGGCGAAGA TATATACACT ATAAAAGATT ATCCAAGACA TGTCTCTTTT ATACCCCAAG ATCCAATGTC TTCCATAAAC CCTAGGTTCG GTGTTTTAGA TGCCATATTA GAACCACTTC GTATAATGTC TTTGGCTTTT GATATGAAAA ATATAATAAA TGATATTTTG GCGCTTGGTT TAAAAGAGGA GCTTTTTAAT AAGAAGATAA GAGATTTATC AGGGGGAGAG CGCCAAAGGG TAGCGATAGC AAGAGCTTTC ATAACAAATC CAGAGCTTAT AATAGCCGAT GAACCTACAT CTTCTTTGGA TGCTATTCAT AAATCCATTG CTGCGTCGCT TTTTTTGAAA ATTAAAGAAA GTAAAACACT TTTTCTAATC ACACACGATA TAAAATTTGC ACAGAAAATT TGTGATAAAA TTGGGGTTAT GTACAATGGA AAAATAGTGG AAATAAGGGA TAAAGAAGAT ATTTTTAAAA GCCCAAAACA TGAGTTTACA AAGACACTTT TAAATAGCTA TTCTCTGGAT TGCAAACAGT ATTCCTATGA ATAG
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Protein sequence | MNTLKIENLY KSFDKKHYIL SNINVEVTKN QSFCIIGPSG SGKSTLGKCI LRFIKPDFGN IYFKGEDIYT IKDYPRHVSF IPQDPMSSIN PRFGVLDAIL EPLRIMSLAF DMKNIINDIL ALGLKEELFN KKIRDLSGGE RQRVAIARAF ITNPELIIAD EPTSSLDAIH KSIAASLFLK IKESKTLFLI THDIKFAQKI CDKIGVMYNG KIVEIRDKED IFKSPKHEFT KTLLNSYSLD CKQYSYE
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