| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0016 |
|---|
| Symbol | |
|---|
| ID | 6742796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 16463 |
|---|
| End bp | 17401 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642749798 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_002120686 |
|---|
| Protein GI | 195952396 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000100275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATAC CGATTAAGCT TATTGCCGGT TCGTCAAATA TGAAGTTAGC TCAAGAAATA
TCTGAATATC TTGATATACC ATTATCAAAA ACACTTCTTA GTAAATTTAG CGATGGTGAG
ATAAGAGTGC AGGTAGAAGA ATCTATGAGA GGTGGAGATA TATTTGTTAT ACAATCGTTA
TCGGCTCCTA TAAACGATCA CATTATGGAG CTTGTACTAC TATTAGATGC TATTAAAAGA
GCGTCTGCTT ATCGTATAAC CGCTGTAATA CCTTATTTTG CCTATGCAAG ACAAGATAGA
AAAGATAAAC CACGTGTTCC TATAAGCGCT AGAGTGCTGG CTGATATGAT TACAACAGCG
GGAGCCCAAA GGGCTGTGAT AATGGATTTA CACTCCCCTC AAATTCAGGG CTTTTTTAAT
ATACCAGTGG ATAATCTCTT GGCTTTACCG GTGCTTTACG ATTATATAAA ATATAAAGTA
GATTCTCCCA ACACTGTTAT AGTATCCCCA GATGCTGGTG GTGCTGAAAG GGCAAGGCAG
CTTGCCAATA AGCTTGGGTG CAATATCGCC ATCATATACA AAAGAAGACC AGAACCAAAT
AAAGCGGAAG TATTTGACGT TATAGGAAAC GTAGAAGGCA AAGATGCCAT CATAATAGAT
GACATTATAG ATACGGCAGG TACCTTGGTG GCTGCTACCA ACATGCTTAT AAACAAAGGA
GCAAAATCTG TTAGAGCGCT AACTACTCAC GGTGTTTTAT CTGGACCAGC ATTAGAGCGT
ATAAACAACT CTATATTAGA AGAGGTAGTA TTAACCAACA CCATATGCCA ACAAGGTAAA
GAATCTAGCA AAATAAACAT AGTAAGCATA GCTCCAATAG TAGGTGAAGC TATAAAGCGT
ATATATGAAA ACTCTTCAGT GAGTTCTTTA TTCGTATGA
|
|---|
| Protein sequence | MGIPIKLIAG SSNMKLAQEI SEYLDIPLSK TLLSKFSDGE IRVQVEESMR GGDIFVIQSL
SAPINDHIME LVLLLDAIKR ASAYRITAVI PYFAYARQDR KDKPRVPISA RVLADMITTA
GAQRAVIMDL HSPQIQGFFN IPVDNLLALP VLYDYIKYKV DSPNTVIVSP DAGGAERARQ
LANKLGCNIA IIYKRRPEPN KAEVFDVIGN VEGKDAIIID DIIDTAGTLV AATNMLINKG
AKSVRALTTH GVLSGPALER INNSILEEVV LTNTICQQGK ESSKINIVSI APIVGEAIKR
IYENSSVSSL FV
|
|---|
| |