Gene HS_1737 details

Gene Information

• Locus tag: HS_1737
• Symbol: topA
• ID: 4241271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1966695
• End bp: 1968725
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638105330
• Product: DNA topoisomerase III
• Protein accession: YP_719942
• Protein GI: 113461873
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0550] Topoisomerase IA
• TIGRFAM ID: [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCT TTCTATGCGA AAAACCCAGT CAGGGACGGG ATATTGCAAA AGTGCTGGGG 
GCAACACAAA AAGGGGAGGG TTATTTATCA ACCGCTGATG GCACAATTGT TGTTACTTGG 
GCGAGAGGGC ATTTAGTTGA GCATTTCTCG CCGGAACAAT ACGATCCCGC ACTTAAGGCA 
TGGCGATTAG ATACTCTCCC GATTATCCCT TCCCAATGGC AAGTTTCCCC TAAACCTGAT 
GCAAAAAAAG AATATAAAAC CGTGATGACA TTGCTGAAAA AAGCACGCAC GGTAGTGATT 
TCAACTGATA TTGATCGAGA AGGGGAAACT ATTGCCCGTG AATTATTAGA CCTTGCCGGT 
TATCGTGGAC ATATTCAGCG GCTGTGGATC ACCGCACTTG ATGAAATCAG TGTGCGTAAA 
GCACTCAGCC GGCTTAAAAC CAATGAAGAA ACCTTGCCTC TTTATTATGC CGGGCTTGCT 
CGTAGTCGGG CAGATTGGTT AATCGGAATG AATTTTAGTC GAATGTTTAC TCTTTTGGCA 
CAACAACAAG GTTATCAAGG TCCGCCACTT TCGGTAGGGC GAGTGCAAAG CCCCACATTG 
GCACTGGTGG TGAATCGAGA TAAGGAAATT GCTCATTTTG TTCCAACCTA TCATTATGCA 
TTGATGGTAC AAGTCTGTGG AACCAATGCT CAGTCTTTTG AGGCAAGCCT TTTGGTTCCT 
GAACAATATT GTGATGAAGA GGGGCGTTGT TTAGAGATAA AGGTGCTTCA GCAAGCGGAA 
CAACAGATTC GTCAGGCGGG ACAAGTGTGT GTGCAGAATG TAGAAACGAA GCGAGAAAAA 
GAAAGTCCGC CGTTACTTTT TGCATTAAGT GATTTGCAGG CGGAATGTAA TCGCCTCTAT 
GATTTAGGTA CACAACAAGT GCTTGATATT GCACAATCCC TCTATGAAAA ACACAAAGCA 
ACTACCTATC CGCGTACGGA TTGCGGTTAT CTTCCTGAAG CACAATTACT TGAAGTGCCT 
CAGGTCATTA ATAGTCTGAT GCAGTCAGAT GCCAAGTTAC AGCCTTTGCG AGTACAGCTT 
AATTTGAGCC AAAAATCCCG TGCGTGGAAT GATAAAAAAA TTACCGCTCA CCATGGGATT 
ATTCCCACAA CACAGCCGGT TGATATTGCT AAAATGAACG AGAATGAGTT TAAAGTTTAT 
GACTTAATTC GTCGGCGTTA TCTCGCACAA TTTCTACCGC ACTTTGAAGT GGATAAAACC 
CGAGTTAGGT TATCTTGTGG AGAGCATCAA TGCATTGCAA AAGGTCAAGT GATTGTGAGT 
GCAGGTTGGA AAGCCTTGTT TCGAGCGTCT AAAGAAGAGC AGGGAGAGAA ACAAGGTTTG 
CCAATACTGA ATAGTGGGCA AATGTTGAAG GTGATGAATA CGGAAATAAA ATCACTTAAA 
ACCACACCGC CTGCACACTA TACAGAAGGT ACACTGCTCA CGGCAATGGT GAATGTCGCC 
CGTTTTGTTA CAGATGAACG GCTAAAGAAA CAATTACGTG AAACGGAAGG ACTGGGGACA 
GAGGCTACTC GGGCAAGTAT TATGAAAACC CTTTATGACC GCGGTTATAT CAAGAAAAAA 
GGGAAATCCA TTGTGGCGAC AGACGCAGGC GTGATGTTGA TTGATAATTT ACCGACGGTA 
TTAAAAGATC CGGGGTTAAC GGCATTATGG GAACAAGCAT TAAATCAAAT TGCCGAGAAC 
CAAATGAGCT TGCAGGAATT TATGCAAAAG CAAGAACAGT TTGTTCTCCA TCTTATTCAA 
ACCTGTGGAC ATCAAGGTAT CAAAATGGGC AATATAGATA TTAAAAAATG CCCACAATGC 
GGTAAGCCAC TTCGAAAAAT GAAAGGGAAA AATGGAGATT TCCTAGGTTG TACGGGCTAT 
CCGAAATGCA AATATATTGA ATCCGGTGCG AAAAGAAAAA CATCTGCCGG AAAAGTTACC 
CCTATCAACC TTTCTCAACA ATTTGCAAAT TTGCGTCAAG CCGTCAAATA A 

 

Protein sequence

MKLFLCEKPS QGRDIAKVLG ATQKGEGYLS TADGTIVVTW ARGHLVEHFS PEQYDPALKA 
WRLDTLPIIP SQWQVSPKPD AKKEYKTVMT LLKKARTVVI STDIDREGET IARELLDLAG 
YRGHIQRLWI TALDEISVRK ALSRLKTNEE TLPLYYAGLA RSRADWLIGM NFSRMFTLLA 
QQQGYQGPPL SVGRVQSPTL ALVVNRDKEI AHFVPTYHYA LMVQVCGTNA QSFEASLLVP 
EQYCDEEGRC LEIKVLQQAE QQIRQAGQVC VQNVETKREK ESPPLLFALS DLQAECNRLY 
DLGTQQVLDI AQSLYEKHKA TTYPRTDCGY LPEAQLLEVP QVINSLMQSD AKLQPLRVQL 
NLSQKSRAWN DKKITAHHGI IPTTQPVDIA KMNENEFKVY DLIRRRYLAQ FLPHFEVDKT 
RVRLSCGEHQ CIAKGQVIVS AGWKALFRAS KEEQGEKQGL PILNSGQMLK VMNTEIKSLK 
TTPPAHYTEG TLLTAMVNVA RFVTDERLKK QLRETEGLGT EATRASIMKT LYDRGYIKKK 
GKSIVATDAG VMLIDNLPTV LKDPGLTALW EQALNQIAEN QMSLQEFMQK QEQFVLHLIQ 
TCGHQGIKMG NIDIKKCPQC GKPLRKMKGK NGDFLGCTGY PKCKYIESGA KRKTSAGKVT 
PINLSQQFAN LRQAVK