Gene HS_1705 details

Gene Information

• Locus tag: HS_1705
• Symbol: gidA
• ID: 4241232
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: -
• Start bp: 1928580
• End bp: 1930469
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 638105291
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_719910
• Protein GI: 113461841
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.673562
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTATA CAGAAAATTA CGATGTCATT GTAATCGGTG GTGGACATGC GGGAACAGAA 
GCTGCTTTAG CGACTGCTCG TATGAAACTA AAAACGCTTT TATTAACTCA TAATATAGAT 
ACTTTAGGAC AAATGTCTTG TAATCCGGCT ATTGGTGGAA TAGGTAAGGG ACATTTAGTA 
AAAGAAATTG ATGCTATGGG CGGATTAATG GCAACTGCTG CAGATAAAGC AGGTATCCAA 
TTTCGCACTT TAAATAGTAG CAAAGGTCCT GCTGTGAGAG CTACACGAGC CCAAGCAGAT 
CGTGTTCTTT ACCGCCAAGT TGTACGTATT GCTCTTGAAA ATCAACCTAA TCTAGATATT 
TTTCAACAAG AAGTAACCGA TATTATTTTA GAAAAAGATA GTGTTACAGG TATTGAAACA 
AAAATGGGAT TAAAATTTAG GGCAAAGTCA GTAGTATTAA CTGCAGGTAC ATTTTTAGCC 
GGTAAGATCC ATATAGGATT AGAAAACTAT GCTGGTGGTC GAGCAGGTGA TCCTGCATCT 
GTAAATCTTG CTAAAAAACT TAGGGATCTA AATTTAAGAG TAAATCGCTT AAAAACAGGA 
ACGCCGCCGA GGATCGATGC TCGTACTATT AATTTTGATA TTCTAGCTAA ACAATATGGC 
GATGAAAAAT TACCTGTTTT TTCTTTTATG GGATCTGTAG AACAACATCC GGAGCAAATT 
CCTTGCTATA TAACTCATAC CAATGATCAA ACGCATGATG TGATTCGCAA AAATTTAGAT 
CGTAGTCCTA TGTATACAGG AGTTATTGAA GGTATTGGAC CACGCTATTG CCCATCTATT 
GAAGATAAAG TAATACGTTT TTCTGATCGT AATTCTCATC AAATTTATTT AGAACCGGAA 
GGTTTAACAA GTAATGAAGT TTATCCAAAT GGTATTTCAA CAAGTTTGCC GTTTGATGTT 
CAAATGAAAA TTGTTAATTC AATGAAAGGA TTAGAGAAAG CAAGAATTGT TAAACCAGGT 
TATGCAATTG AATATGATTA TTTTGATCCA AGAGACTTAA AATCAACTTT GGAAACAAAA 
GCTATTTCTG GTTTATTTTT TGCTGGTCAA ATTAATGGTA CAACGGGCTA TGAAGAAGCT 
GCTGCACAGG GTTTATTAGC TGGTATTAAT GCAGGTTTAT TTGTTCAAGA AAAAGAAAGT 
TGGTTTCCTC GTAGAGATCA AGCCTATATA GGGGTTTTGG TTGATGATCT TTGTACTGTA 
GGAACTAAAG AACCTTATAG AGTATTTACT TCAAGAGCAG AATATCGCTT ATTGTTGCGT 
GAAGATAATG CTGATATTCG TTTAACTTCA ATTGCAAGAA AATTAGGATT AATTGATGAT 
ATTCGCTGGG CAAGATTTAA TCAAAAAATG GAAAATATTG AACTGGAACG TCAACGTTTG 
CGTTCAATCT GGTTGCATCC TCGTTCTGAA TATTTAAATG AGGCTAATGA AATATTAAAA 
AGCCCACTTA TCCGTGAAGT AAATGGGGAA GATTTATTAC GTCGTCCTGA AATAAATTAT 
CAAATTTTGA CCGCACTTAC TCCTTTTAAA CCGGCAATGG AAGACAAAGA AGCTGTTGAA 
CAAGTTGAAA TTGCAATTAA ATATCAAGGT TATATTGAAC ATCAACAAGA AGAAATTGAG 
CGTCAAAAAC GCCATGAAAA TACGGCTATT CCTGCTAATT TTGATTATAA AAATATATCG 
GGATTATCCA ATGAAGTTTG TGCTAAACTG GAACAATACC GCCCAATTTC TATTGGTCAA 
GCGAGTCGAA TTTCAGGTAT TACGCCTGCA GCTATTTCTA TTTTACTCGT TAATTTAAAA 
AAACAAGGTA TGCTGAAACG AGGTGAATAA 

 

Protein sequence

MFYTENYDVI VIGGGHAGTE AALATARMKL KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDAMGGLM ATAADKAGIQ FRTLNSSKGP AVRATRAQAD RVLYRQVVRI ALENQPNLDI 
FQQEVTDIIL EKDSVTGIET KMGLKFRAKS VVLTAGTFLA GKIHIGLENY AGGRAGDPAS 
VNLAKKLRDL NLRVNRLKTG TPPRIDARTI NFDILAKQYG DEKLPVFSFM GSVEQHPEQI 
PCYITHTNDQ THDVIRKNLD RSPMYTGVIE GIGPRYCPSI EDKVIRFSDR NSHQIYLEPE 
GLTSNEVYPN GISTSLPFDV QMKIVNSMKG LEKARIVKPG YAIEYDYFDP RDLKSTLETK 
AISGLFFAGQ INGTTGYEEA AAQGLLAGIN AGLFVQEKES WFPRRDQAYI GVLVDDLCTV 
GTKEPYRVFT SRAEYRLLLR EDNADIRLTS IARKLGLIDD IRWARFNQKM ENIELERQRL 
RSIWLHPRSE YLNEANEILK SPLIREVNGE DLLRRPEINY QILTALTPFK PAMEDKEAVE 
QVEIAIKYQG YIEHQQEEIE RQKRHENTAI PANFDYKNIS GLSNEVCAKL EQYRPISIGQ 
ASRISGITPA AISILLVNLK KQGMLKRGE