Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1613 |
Symbol | rfaD |
ID | 4241140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1827809 |
End bp | 1828738 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638105199 |
Product | ADP-L-glycero-D-mannoheptose-6-epimerase |
Protein accession | YP_719818 |
Protein GI | 113461749 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATTG TTACAGGTGG AGCAGGATTA ATTGGAAGTA ATATCATTGC GGCATTAAAC GATATGGGAC GTCGAGATAT TTTGGTAGTG GACAACCTGA CTGATGGGAC AAAATTTGTC AATTTGGTCG ATTTGGATAT TGCGGATTAT TGTGATAAAG AAGATTTTAT TGCCTCTATC ATTGCCGGTG ATGATTTTGG AGATATTGAT GCAATTTTCC ATCAAGGCGC TTGTTCTGCT ACAACAGAAT GGAACGGTAA ATATTTAATG CAAAATAATT ATGAATATTC AAAAGAACTA TTGCATTATT GTCTATTACG TGAAATTCCT TTCTTTTATG CCTCAAGTGC GGCGACTTAT GGCGATAAAA CAGACTTTAT TGAAGAACGC CAATTTGAAG GTCCGTTAAA TGTTTATGGC TATTCAAAAT TCCTATTTGA TGAATACGTG CGTCAAATTC TGCCACAGGC TACGTCGCCT GTTTGTGGGT TCAAATATTT CAATGTATAT GGTCCTCGTG AACAACATAA GGGTTCGATG GCAAGTGTTG CATTCCATTT AAATAATCAG ATGTTGAAAG GAGAAAATCC AAAATTATTT GCAGGATCAG AGCATTTTTT GCGTGATTTT GTTTATGTGG GCGATGTGGC AAAAGTGAAT TTGTGGGCAT GGCAACATGG TATTTCAGGC ATTTATAATT GTGGAACAGG TAGAGCGGAA AGTTTTGAAC AAGTAGCAAG AGCAGTGTTG AATTATCATG GCAAAGGTGA AATTGAAACT ATTCCATTCC CTGAGCATTT AAAATCACGT TATCAAGAAT ATACACAAGC TAATTTAACA AAATTACGTG CCGCTGGTTA TCAAGCAGAA TTTAAGTCGG TTGCCGAAGG TGTGGCGGAA TATATGCAAT GGTTAAATCG CAAGTCTTGA
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Protein sequence | MIIVTGGAGL IGSNIIAALN DMGRRDILVV DNLTDGTKFV NLVDLDIADY CDKEDFIASI IAGDDFGDID AIFHQGACSA TTEWNGKYLM QNNYEYSKEL LHYCLLREIP FFYASSAATY GDKTDFIEER QFEGPLNVYG YSKFLFDEYV RQILPQATSP VCGFKYFNVY GPREQHKGSM ASVAFHLNNQ MLKGENPKLF AGSEHFLRDF VYVGDVAKVN LWAWQHGISG IYNCGTGRAE SFEQVARAVL NYHGKGEIET IPFPEHLKSR YQEYTQANLT KLRAAGYQAE FKSVAEGVAE YMQWLNRKS
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