| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1578 |
|---|
| Symbol | iolD |
|---|
| ID | 4241105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1790102 |
|---|
| End bp | 1792039 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638105164 |
|---|
| Product | myo-inositol catabolism protein |
|---|
| Protein accession | YP_719783 |
|---|
| Protein GI | 113461714 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3962] Acetolactate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.505237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAG TGAGATTAAC GGTAGCTCAA GCATTAGTAA AATTTCTTGA TAACCAATAT
ATTGAGTTCG ATGGAAAGGT AACAAAATTC GTTGAAGGCA TTTTCGGGAT TTTTGGACAT
GGTAACGTGC TGGGTTTAGG TCAAGCACTG GAACAGGATA GTGGCGAATT GATTGTGCGT
CAAGGACGTA ACGAGCAGGG CATGGCTCAT GTAGCAATAG GGTTTGCGAA GCAAAAATTA
CGCAAACAAA TCTATGCCTG TACTTCATCT GTTGGTCCGG GGGCTGCAAA TATGATTACA
GCAGCTGCAA CAGCAACGGC AAACCGTATT CCACTTCTTT TATTGCCGGG TGATGTTTTT
GCTACTCGTC AACCAGACCC TGTGTTGCAA CAAATTGAAC AAACTTATGA TTTAAGTATT
AGCACCAATG ATGCTTTTCG TGCGGTAAGT AAATACTGGG ATCGTGTAAG TCGTCCTGAA
CAATTAATGA CAGCTTGTAT CAATGCAATG CGTGTATTGA CTGATCCTGC AGAAACCGGT
GCGGTGACAA TTGCATTGCC ACAAGATGTC CAGACTGAAG CTTATGATTT TCCTGAGTAT
TTTTTACAAA AACGTATTCA TCGCATGGAG CGTACGCCTC CAACGGAAGC GATGCTACAA
GATGCTTTGA CCTTAATTCA AAATGCGAAA AAACCACTAA TTATTTGTGG TGGTGGAGTG
CGGTACTCTG AGGCGGCAGA GCAATTAAAA GCCTTCGCTG AAATTTATAA TATTCCATTT
GCAGAGACTC AAGCGGGTAA AAGTGCGGTA GTTTCTGAGC ATTATTTGAA TGTTGGCGGT
ATAGGTGTAA CAGGTTGTGT AGCTGCAAAT TTATTAGCAC CGGAGGCTGA TTTAGTCATT
GGTATTGGTA CAAGATATAC TGATTTTACG ACGGGATCTA AATGGATTTT CAATAATGAC
GAAGTGAAAT TCTTAAATAT CAACGTTGCT CGCTTTGATG CTTATAAGTT AGATGGTGTA
CAAGTTACAG CTGATGCCAA AGAAACGCTG GAAAAATTAA CCGCACTTTT AGCTACAACA
GGTTATCAAG CCCACTGGGG TGATAAAGTG GCACAGGCAA AAAAAGCGTT GGAAACTGAA
TTAGAGCGTG TTCACAATAT AACTTATACC GAAGATTTTG TACCTGAAAT TGATGATCGT
TTAAATCGTG AGGCGGTTTA TGCTGAATTT ATGGAGATGA CCAAATCTTG TTTAGCTCAA
ACAAGGGTGT TAGGTATTTT AAATGAAACA TTAGGTGAAA ATGATGTCAT CGTGGGGGCT
GCGGGTAGTT TGCCAGGCGA TTTACAACGT ATTTGGCAAG CTAAAGGCGA AAATACCTAT
CATTTGGAAT ACGGTTATTC TTGTATGGGG TATGAAGTTA GTGCTGCTCT AGGGGTCAAA
ATTGCAGAAC CTCATCGTGA AGTTTATACC TTATTAGGTG ATGGATCTTA CATGATGTTG
CATTCTGAAC TGGTAACGTC AATTCAAGAA AATAGAAAAA TTAACGTAAT ATTATTCGAT
AATATGACAA ACGGTTGTAT CAATAACTTA CAAATTGGTC ATGGTATGGA CAGTTTTGCA
ACGGAATTTC GTTTTAGAAA CAAGAATACC AATAAATTAG ATGGGGGCTT TGTACCGGTT
AATTTTGCTA TGAATGCCGC ATCTTACGGT TGCAAAACCT ATCAAGTAAC TACCGAAGAA
GAGCTACGAT TGGCTTTGGC TGATGCAAAA AAACAACAGG TTTCTACTTT AATTGATATT
AAGGTTTTAC CAAAAACGAT GGCGAAGGGA TATGACAGCT GGTGGCACGT TGGTGTGGCT
GAGGTGTCAA ATAAAGCTGA AATTAATGCT GCCTATGAAG ATTCTATTGC TCATATTGAG
GTAGCAAGAC GTTACTAA
|
|---|
| Protein sequence | MKTVRLTVAQ ALVKFLDNQY IEFDGKVTKF VEGIFGIFGH GNVLGLGQAL EQDSGELIVR
QGRNEQGMAH VAIGFAKQKL RKQIYACTSS VGPGAANMIT AAATATANRI PLLLLPGDVF
ATRQPDPVLQ QIEQTYDLSI STNDAFRAVS KYWDRVSRPE QLMTACINAM RVLTDPAETG
AVTIALPQDV QTEAYDFPEY FLQKRIHRME RTPPTEAMLQ DALTLIQNAK KPLIICGGGV
RYSEAAEQLK AFAEIYNIPF AETQAGKSAV VSEHYLNVGG IGVTGCVAAN LLAPEADLVI
GIGTRYTDFT TGSKWIFNND EVKFLNINVA RFDAYKLDGV QVTADAKETL EKLTALLATT
GYQAHWGDKV AQAKKALETE LERVHNITYT EDFVPEIDDR LNREAVYAEF MEMTKSCLAQ
TRVLGILNET LGENDVIVGA AGSLPGDLQR IWQAKGENTY HLEYGYSCMG YEVSAALGVK
IAEPHREVYT LLGDGSYMML HSELVTSIQE NRKINVILFD NMTNGCINNL QIGHGMDSFA
TEFRFRNKNT NKLDGGFVPV NFAMNAASYG CKTYQVTTEE ELRLALADAK KQQVSTLIDI
KVLPKTMAKG YDSWWHVGVA EVSNKAEINA AYEDSIAHIE VARRY
|
|---|
| |