Gene HS_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1480 
Symbol 
ID4241000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp1672855 
End bp1673424 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content40% 
IMG OID638105061 
Productpermease 
Protein accessionYP_719690 
Protein GI113461621 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAA CAAAAGATAA CTTAGCGAAT CCGGCACCAT TGGGCTTATG TGGGTTTGCA 
TTAACAACTT GGTTATTAAG TTTAATCAAT AACGGTATGT TCAGCGGTGA AAATTTAGGT 
TTAGTACTGG CCATGGGATT TGCGTTTGGT GGTACAGCCC AAATGATCGC CGGTATGTTT 
GAATACAAAA AAGGTAATAC TTTCGGTTTT ACTGCGTTTA CCAGCTATGG TGCCTTTTGG 
TGGAGTTTTG CCTTATTCAA AGTATTTTTC TCACAAGGTG TCACATCATC TTTTGTAGGC 
TGGTACTTAG CGGCGTGGGG AACATTCACA TTGATGATGT TTATCGGCAC ATTAGCAAAA 
ACTCGTGCAT TACAGGCTAT TTTCTTAGCG TTAACCATCA CCTTCTACTT ACTTGCTGCA 
GGCGATTTTA CCGGTAATCA CAACTTTAGC CAACTAGGTG GAAACTTTGG TTTATTGACC 
GCACTTTTAG CGTTCTATCT CGCTGCTGCT GATATTATCA ATGAAAGTTT TGGTAAAACC 
ATATTACCAA TTGGTGAGCC TAAATTATAA
 
Protein sequence
MSTTKDNLAN PAPLGLCGFA LTTWLLSLIN NGMFSGENLG LVLAMGFAFG GTAQMIAGMF 
EYKKGNTFGF TAFTSYGAFW WSFALFKVFF SQGVTSSFVG WYLAAWGTFT LMMFIGTLAK 
TRALQAIFLA LTITFYLLAA GDFTGNHNFS QLGGNFGLLT ALLAFYLAAA DIINESFGKT 
ILPIGEPKL