Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1468 |
Symbol | nrdD |
ID | 4240988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1658268 |
End bp | 1660394 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638105049 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_719678 |
Protein GI | 113461609 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.897136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTCAT TCTTCGTTAT TAAACGTGAT GGTTCACGTG CAGAATTTGA AATACAAAGA ATTATTAATG CTATTAAAAA AGCTGCAAGT GCGGTCAATA TCCAAGATGA AATGTTTTGT CATAAAATCG GACAACTGGT CTGCGATGAT ATTTTTGCTC ACCACCAAAA AGAAATTGAT ATTAGCCGCA TTCAGGAGAT TGTTGAAAAT CATCTGATGG GTAGTCAATA TCCACAAGTT GCACGTGCTT ATATTGAATA TCGTCATGAG CGTGATTTAG CCCGAGAGAA ACGTAGTAAT TTGACTAAAG AAATTGAAGG ATTAATTCAA CAAAGTAATG TGGAATTGTT AAATGAGAAT GCCAATAAAG ATGCGAAAGT CATTCCAACT CAGCGTGATT TATTGGCGGG TATTGTCGCT AAACATTATG CTAAACGTTA TATTCTGCCA AAAGATGTTG TTGAATCCCA TGAAAAAGGC GAAATTCATT ACCATGATTT AGATTATGCA CCATTCTTTC CTATGTTTAA TTGCATGCTG GTTGATTTAA AAGGCATGCT GACACAAGGA TTTAAAATGG GTAATGCGGA AATTGAACCG CCTAAATCTA TTGGTACTGC AACTGCGGTT ACCGCACAAA TTATCGCTCA AGTAGCAAGT CATATTTATG GGGGCACCAC GGTTAATCGT ATTGATGAAG TACTTGCACC TTATGTGCAA CTCAGCTATG AAAAACACTT GAAAACAGCT GCACTTTGGC AAATTCCAGA TCCCAAAGCT TATGCCGACA GTTTAATTCA AAAAGAATGT TTTGATGCTT TTCAATCGTT GGAATATGAA GTCAACACTC TGCATACTGC CAATGGACAA ACGCCATTTG TTACTTTTGG GTTTGGTTTG GGGATTAGTT GGCAAGAGCG GTTGATTCAG AAAGCTATTT TGCAAAACCG AATTCGTGGA TTGGGGAAAA ATCATAAAAC ACCTGTTTTT CCTAAGTTGG TTTTTACAAT TAAAAAAGGG GTCAATCAAA ATTCAGGAGA TCCGAATTAT GATATTAAAC AGCTCGCTTT AGAATGTGCT TCAAAACGCA TGTATCCGGA TATTCTCAAT TATGATCAAG TTGTGAAAGT AACAGGTTCA TTTAAAGCAC CAATGGGATG CCGTAGTTTT CTTGGTGCTT ATGAAGAAAA TAACGAATTG GTCCATGATG GACGGAATAA TTTGGGTGTA GTTAGCCTAA ATTTGCCACG TATTGCACTG GAAGCGAAAG GCGATGAGCA GCAATTCTAT ACATTGCTTG AAGCAAGGTT GGATCTTGCT AAAAAAGCAT TGATGACACG TATTGCCCGT TTGGAAAATA CAAAAGCACG AGTTGCACCA ATTTTATATA TGGAGGGAGC TTGTGGTGTT CGTTTAAAAG CAGATGATAA TGTGGCACAA ATTTTTAAAA ACGGTAGAGC ATCAATTTCG CTTGGTTATA TTGGTATTCA TGAAACTATT AACGCCCTAT TTGGCGGTAA ACACATTTAT GATGATACAA AATTGCGTAA AAAGGGCATT GAAATTGTCA GTTTCTTGAG CGAAAAAGTT AAACATTGGA AAGCGGAAAC AGGCTATGCT TTTAGTTTAT ATTCCACACC GAGCGAAAAC TTGTGTGATC GTTTTTGTCG TTTAGATACG AAACAGTTTG GTGTTGTTGA TGGAGTGACG GACAAAGGTT ATTACACAAA TAGCTATCAT TTAGATGTTG AGAAAAAAGT AAATCCTTAT GATAAATTGG ATTTTGAGAT GCCTTACCCT CCTTTAGCGA GCGGTGGATT TATTTGCTAT GGTGAATATC CAAATATTCA GCATAATTTA AAAGCACTTG AAGATGTTTG GGACTATTCT TATGAACGAG TTCCTTATTA TGGTACTAAT ACACCGATTG ATGAATGCTA TGAATGTGGT TTTACAGGAG AGTTTAGTTG TACAAGCAAA GGGTTTACTT GCCCTAAGTG CGGTAATCAT GATAGTGAAA AAGTCTCTGT AACCCGTCGA GTATGCGGTT ATTTAGGAAG CCCGGATGCA CGTCCGTTTA ATGCTGGAAA ACAAGAAGAG GTTAAACGCC GTGTTAAACA TTTATAA
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Protein sequence | MGSFFVIKRD GSRAEFEIQR IINAIKKAAS AVNIQDEMFC HKIGQLVCDD IFAHHQKEID ISRIQEIVEN HLMGSQYPQV ARAYIEYRHE RDLAREKRSN LTKEIEGLIQ QSNVELLNEN ANKDAKVIPT QRDLLAGIVA KHYAKRYILP KDVVESHEKG EIHYHDLDYA PFFPMFNCML VDLKGMLTQG FKMGNAEIEP PKSIGTATAV TAQIIAQVAS HIYGGTTVNR IDEVLAPYVQ LSYEKHLKTA ALWQIPDPKA YADSLIQKEC FDAFQSLEYE VNTLHTANGQ TPFVTFGFGL GISWQERLIQ KAILQNRIRG LGKNHKTPVF PKLVFTIKKG VNQNSGDPNY DIKQLALECA SKRMYPDILN YDQVVKVTGS FKAPMGCRSF LGAYEENNEL VHDGRNNLGV VSLNLPRIAL EAKGDEQQFY TLLEARLDLA KKALMTRIAR LENTKARVAP ILYMEGACGV RLKADDNVAQ IFKNGRASIS LGYIGIHETI NALFGGKHIY DDTKLRKKGI EIVSFLSEKV KHWKAETGYA FSLYSTPSEN LCDRFCRLDT KQFGVVDGVT DKGYYTNSYH LDVEKKVNPY DKLDFEMPYP PLASGGFICY GEYPNIQHNL KALEDVWDYS YERVPYYGTN TPIDECYECG FTGEFSCTSK GFTCPKCGNH DSEKVSVTRR VCGYLGSPDA RPFNAGKQEE VKRRVKHL
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