Gene HS_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1448 
SymbolfucI 
ID4240964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1635148 
End bp1636914 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content41% 
IMG OID638105026 
ProductL-fucose isomerase 
Protein accessionYP_719660 
Protein GI113461591 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID[TIGR01089] L-fucose isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACATT TAAAATCAGC ACCGGTAAAA ATCGGTATCC GTCCAACTAT TGATGGACGT 
CGTATGGGCG TTCGTGAATC TTTAGAAGAT CAAACCATGA ATATGGCAAA AGCGGTTGCT
CAATTAATTG AAACGGAAGT GCGGCACACA AATGGGCAAT TTGTGAAATG TGTAATTGCG
GACACCACGA TTGGTGGTGT CGCTGAAGCT GCTGCATGTG CTGAAAAATT CAAACGTGAA
AATGTCGGTG CAGTCATCAC TGTAACCCCT TGCTGGTGCT ATGGTTCTGA AACAATCGAT
ATGGATCCTC ATATGCCAAA AGCAATTTGG GGCTTTAACG GTACAGAACG TCCCGGTGCG
GTGTATTTGG CAGCGGCTCT TGCCGGACAT AACCAAATGG GGCTACCTGC ATTCTCTATT
TACGGTACTG AAGTTCAAGA AGCATCTGAT ACAACAATTC CAACAGATGT TAAAGAGAAA
TTACTACGTT TTGCTCGTGC CGGTCTCGCA GTTGCGACTT TACGTGGTAA ATCTTACTTA
TCTATAGGTT CAGTTTCTAT GGGTATTGCC GGTTCTATCG TTAATCAAGC ATTCTTTCAA
GAATATTTGG ATATGCGTAA TGAATATGTA GATATGACCG AAATTAAACG CCGTTTAGAT
CGCAAAATCT ATGATGAAAA AGAAGTTAAA TTAGCGATGG AATGGGTCAC TCAATACTGT
AAAGAAGGTA TTGATGTAAA TGCTGAAGAA AATCAGCGTA GTTCGGAAGA ACGTGCAAAA
CTTTGGGAAA ATGTTGTCAA AATGACGATT ATTTGTCGTG ATCTAATGGT TGGTAATCCT
CGTTTAGCTG AACTTGGTTA TGTAGAAGAA TCAATGGGAC ATAATTCGAT TGGTGCTGGT
TTCCAAGGTC AACGCCATTG GACAGATCAT CTGCCGAACG GCGACTTTAT GGAAGCAATA
TTGAATTCAA CTTATGACTG GAACGGTGTA CGTCCTCCTT ATATTTTAGC CACAGAAAAT
GATTCATTAA ATGGCGTTAA CATGTTATTC GGCAATTTGC TAACCGGTCA GGCTCAAATT
TTTGCTGATG TACGTACCTA TTGGAGTGAA GATTCTGTTG AGCGTGTAAC AGGTTGGCGT
CCTGAAAGTG GATTTATTCA TTTACTAAAT TCCGGCTCTG CCGCTTTGGA TGGCACGGGA
CAACATACAG ATCCAAACGG AACATCAGTC ATTAAACCGG TATGGGAAGT AACAGAAGAA
GATGGAAAGC GTTGCTTAGA AAATACTCGT TGGTGTCCAG CGGTACACGA ATATTTCAGA
GGAGGCGGTT TATCGTCACA ATTTTTAACT AAAGGCGGGA TGCCATTTAC CATACATAGA
ATTAACTTAG TCAAAGGTAT TGGGCCTGTT TTACAAATCG CCGAAGGATG GTCTATTGCT
TTACCAGAAA ACGTGCATGA TATTTTAAAT AAACGTACTG ATCAAACATG GCCAACTACT
TGGTTTGTTC CACGTTTAAC GGGTACAGGA GCATTTACTG ACGTTTATTC TGTCATGGCA
AATTGGGGGG CAAACCATTG CGTTGCAACT TATGGACATG TTGGTGCTGA TTTGATCACT
CTTGCTTCCA TGCTACGTAT TCCAGTCTGT ATGCACAATG TCGAAGAAAA AGACATTTTC
CGTCCAAGTG CTTGGAGTGC ATTTGGTCAA GATAAAGAAG GTCAAGATTA CCGTGCTTGT
GCAAACTTTG GTCCTTTATA TCGTTAA
 
Protein sequence
MTHLKSAPVK IGIRPTIDGR RMGVRESLED QTMNMAKAVA QLIETEVRHT NGQFVKCVIA 
DTTIGGVAEA AACAEKFKRE NVGAVITVTP CWCYGSETID MDPHMPKAIW GFNGTERPGA
VYLAAALAGH NQMGLPAFSI YGTEVQEASD TTIPTDVKEK LLRFARAGLA VATLRGKSYL
SIGSVSMGIA GSIVNQAFFQ EYLDMRNEYV DMTEIKRRLD RKIYDEKEVK LAMEWVTQYC
KEGIDVNAEE NQRSSEERAK LWENVVKMTI ICRDLMVGNP RLAELGYVEE SMGHNSIGAG
FQGQRHWTDH LPNGDFMEAI LNSTYDWNGV RPPYILATEN DSLNGVNMLF GNLLTGQAQI
FADVRTYWSE DSVERVTGWR PESGFIHLLN SGSAALDGTG QHTDPNGTSV IKPVWEVTEE
DGKRCLENTR WCPAVHEYFR GGGLSSQFLT KGGMPFTIHR INLVKGIGPV LQIAEGWSIA
LPENVHDILN KRTDQTWPTT WFVPRLTGTG AFTDVYSVMA NWGANHCVAT YGHVGADLIT
LASMLRIPVC MHNVEEKDIF RPSAWSAFGQ DKEGQDYRAC ANFGPLYR