Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1273 |
Symbol | |
ID | 4240784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1459637 |
End bp | 1461589 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638104846 |
Product | ABC transporter, ATP-binding/permease |
Protein accession | YP_719485 |
Protein GI | 113461416 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCGTC AAGGATTAGC CGAAAGACTT GCTCAAGGCG GAGCAAGATT CAAAGCGTTA TCAATGGCCT CTAAAATTGC TTTAATGTTT ATCATGTTGA TTGCATTAAT TGCTATTTTT GCACCTTGGG TTTCTCCTTA TGATCCATTA CAAACCTTAC GACCGGTTCA AGCACCAAGT AGTGACTATT GGTTTGGCAC AGATCGTCTA GGACGAGATA TTTTCTCTCG TTTAGTGTTT GGTGCAAGAA CATCATTGTT TATTGGCTTA GGTGCGGTAG GTTTTGCAAT AATTTTTGGT AGCATACTAG GTGCAACCGC TGCTACAGCG AGTAAATTTG GTAATGAAGT CATCATGCGT CTAATGGATA TTTTAATGGC ATTTCCGGGA ATTGCATTAG CTGCGGTATT ATTGGCTACT TTTGGTAACT CTGTTCCGAT TATTATTTTA ACTATCGCGG TAGTTTATAC GCCACAGTTA GCAAGGGTTG TACGAGCTAA TGTAGTTTCT CAGTGGGAAG AAGATTATAT TAGAGCGGAG CGAGTAATTG GTGGCAGTAG AAGCTATATT TTATTAAAGC ATGTAGTTCG CAATACTGCC GCCCCTGTTT TGGTTTTTGC TACAGTGATG GTAGCAGATG CAATTGTATT GGAAGCTTCT CTTTCCTTCT TAGGAGCCGG AGTACAACCC CCTTATCCAT CTTGGGGAAA TGTTTTATCC GAAGGTCGAA ATTTAGTATT AAGTGGCTTT TGGTGGGCTA CTACCTTTGC TGGATTAATG ATTTTGTTGA CCGTTTTATC ACTTAATATT TTGTCAGAAG GACTAACTGA TGCTCTCGTG AATCCAAAAC TTAAACGTAA TCCAAATAAC AAAGGTGATG TATCAAAGCC TCTTGCTACC GATGTACAAG AAGCTATGGC GGAAAGTTTA GCACTTAAAC GTTATTTATT AAAATTAAAT CAAAAAGAAT CGGAACGTAC TGATAGAATG CAACTTAATT CAGCAATGAA GCCAATTTTG CAAGTAAAGA ATTTATCTAT TCGTTTTCCA AATCGTTATG GTGATATTCC ACTAGTGGAT AATATTAGTT TTACTGTTCA TGAAGGTGAA ACTATGGGGC TGGTAGGCGA GTCAGGCTGT GGTAAATCAA TTTCTGCATT TTCCATTATG GGATTATTGC CTAAAACAGC CAAGATTACG GGAGAAATAC TTTTTACAGA TCGTGCAGGA AATCAACATG ATTTATTGAA AACAGATAAA TTAAATGATT TACGTGGTCA CGAAATTTCT ATGATTTATC AAGATGCTTT AAGTGCGTTA AACCCATCAA TGCGAATTAA AGATCAAATG GCACAACTGA TTCAGCGTGG CGGAAAACAA AGTGCGGAAA CACTTTTACG ATGGGTTAAA TTAGAGCCTG AAAAAACGTT AACTCGCTAT CCCCACGAAT TATCGGGCGG ACAACGTCAA CGAGTATTAA TTGCAATGGC ATTGGCTAGA GAACCGAAAT TATTGATTGC TGATGAACCT ACTACCGCAC TTGATGTAAC AGTGCAGGCA GAAGTAATTA AATTACTTAA TGAATTACGA GAAAAATTGG GCTTTGCTAT GGTTTTTGTT AGCCATGATT TAGCCTTAGT AGCACAAATC GCTCATCATA TTACAGTAAT GTATGCAGGG CAGGTAGTAG AAGTCGCTCC AACAAGTTCA TTATTAATGA ATCCAATGCA TGAATATACT AGAGGGTTGC TGGGTTCAGT ACTTTCTACT GAGTGTAGAG CGGAACGCTT GTATCAAATT CCTGGCAGTG TACCATCGCC TTTTGATTTT GCTGAAGGAG ATCGATTTGC CAGTCGTTCT CTTCGTCCTA ATGCAAATCC AAATCAACAT TTGAAATTAG TACAAGCAGA AGATAATCCG AAACATTTAT GGGCATCGCA TTTGGAGAAT TAA
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Protein sequence | MFRQGLAERL AQGGARFKAL SMASKIALMF IMLIALIAIF APWVSPYDPL QTLRPVQAPS SDYWFGTDRL GRDIFSRLVF GARTSLFIGL GAVGFAIIFG SILGATAATA SKFGNEVIMR LMDILMAFPG IALAAVLLAT FGNSVPIIIL TIAVVYTPQL ARVVRANVVS QWEEDYIRAE RVIGGSRSYI LLKHVVRNTA APVLVFATVM VADAIVLEAS LSFLGAGVQP PYPSWGNVLS EGRNLVLSGF WWATTFAGLM ILLTVLSLNI LSEGLTDALV NPKLKRNPNN KGDVSKPLAT DVQEAMAESL ALKRYLLKLN QKESERTDRM QLNSAMKPIL QVKNLSIRFP NRYGDIPLVD NISFTVHEGE TMGLVGESGC GKSISAFSIM GLLPKTAKIT GEILFTDRAG NQHDLLKTDK LNDLRGHEIS MIYQDALSAL NPSMRIKDQM AQLIQRGGKQ SAETLLRWVK LEPEKTLTRY PHELSGGQRQ RVLIAMALAR EPKLLIADEP TTALDVTVQA EVIKLLNELR EKLGFAMVFV SHDLALVAQI AHHITVMYAG QVVEVAPTSS LLMNPMHEYT RGLLGSVLST ECRAERLYQI PGSVPSPFDF AEGDRFASRS LRPNANPNQH LKLVQAEDNP KHLWASHLEN
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