Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1233 |
Symbol | |
ID | 4240744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1399053 |
End bp | 1399679 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 638104806 |
Product | hypothetical protein |
Protein accession | YP_719445 |
Protein GI | 113461376 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2095] Multiple antibiotic transporter |
TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATTTT CTGTTTATCT ACAATTTTTT ATTGGGTTAA TTGCGTTGGT TAATCCAATT GGGGTTGTTC CTATCTTTTA TACGATGACA TCTGGTCAAA GTCGTGTTCA GCAAAGTCAT ACTGCTATGA TTACTTGTTT TTCGATTGTC GTTATTTTAT TGATCAGTTT TTATTTCGGT AATTTCATTT TAAGTTCGTT CAATATATCG ATTAATTCAT TCAGAATTGC CGGCGGTATT GTCGTTGTGA TGATTGCTTT AACTATGATT AATGGAAAAA TTGGTGATCA CAAAATTAAT AAAGAGGAAC AAAAAGAGGA TTTTAGCGAA AAAGATAATA TTGCAGTCGT TCCGTTAGCT ATGCCAATTT TAGCGGGTCC AGGATCAATT AGTGCTACTA TTGTTCTAGG TTCTAGTCAG AGTTCATGGA GCGAATACTT ATATTCGTCT ATTACAATCG CACTTTTTGG GTTAACTTGT TATATTTTAT TTCGTTATTC AGAGCCAGTT ATAGAAAAAT TAGGTAAGAC AGGATCAAAT GTAATAACAA GGATTATGGG GTTATTGCTA ATGTCTTTAG GTGTAGAAAT TATCACTACC GGCTTAAAAA ATATAGGCGT TTTTTAG
|
Protein sequence | MEFSVYLQFF IGLIALVNPI GVVPIFYTMT SGQSRVQQSH TAMITCFSIV VILLISFYFG NFILSSFNIS INSFRIAGGI VVVMIALTMI NGKIGDHKIN KEEQKEDFSE KDNIAVVPLA MPILAGPGSI SATIVLGSSQ SSWSEYLYSS ITIALFGLTC YILFRYSEPV IEKLGKTGSN VITRIMGLLL MSLGVEIITT GLKNIGVF
|
| |