Gene HS_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1233 
Symbol 
ID4240744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1399053 
End bp1399679 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content33% 
IMG OID638104806 
Producthypothetical protein 
Protein accessionYP_719445 
Protein GI113461376 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTT CTGTTTATCT ACAATTTTTT ATTGGGTTAA TTGCGTTGGT TAATCCAATT 
GGGGTTGTTC CTATCTTTTA TACGATGACA TCTGGTCAAA GTCGTGTTCA GCAAAGTCAT
ACTGCTATGA TTACTTGTTT TTCGATTGTC GTTATTTTAT TGATCAGTTT TTATTTCGGT
AATTTCATTT TAAGTTCGTT CAATATATCG ATTAATTCAT TCAGAATTGC CGGCGGTATT
GTCGTTGTGA TGATTGCTTT AACTATGATT AATGGAAAAA TTGGTGATCA CAAAATTAAT
AAAGAGGAAC AAAAAGAGGA TTTTAGCGAA AAAGATAATA TTGCAGTCGT TCCGTTAGCT
ATGCCAATTT TAGCGGGTCC AGGATCAATT AGTGCTACTA TTGTTCTAGG TTCTAGTCAG
AGTTCATGGA GCGAATACTT ATATTCGTCT ATTACAATCG CACTTTTTGG GTTAACTTGT
TATATTTTAT TTCGTTATTC AGAGCCAGTT ATAGAAAAAT TAGGTAAGAC AGGATCAAAT
GTAATAACAA GGATTATGGG GTTATTGCTA ATGTCTTTAG GTGTAGAAAT TATCACTACC
GGCTTAAAAA ATATAGGCGT TTTTTAG
 
Protein sequence
MEFSVYLQFF IGLIALVNPI GVVPIFYTMT SGQSRVQQSH TAMITCFSIV VILLISFYFG 
NFILSSFNIS INSFRIAGGI VVVMIALTMI NGKIGDHKIN KEEQKEDFSE KDNIAVVPLA
MPILAGPGSI SATIVLGSSQ SSWSEYLYSS ITIALFGLTC YILFRYSEPV IEKLGKTGSN
VITRIMGLLL MSLGVEIITT GLKNIGVF