Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1222 |
Symbol | |
ID | 4240725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1382730 |
End bp | 1383455 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104787 |
Product | SAM-dependent methyltransferase |
Protein accession | YP_719434 |
Protein GI | 113461365 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | [TIGR00740] methyltransferase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.100139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAG ATTGTATTTT TGCTGCACCC ATTGAAAAAC TGGGAGATTT TACTTTTGAT GAAAATGTCG CTGAAGTATT CCCTGATATG ATACAGCGTT CTGTCCCCGG ATATTCCAAT ATCATTACTG CCATCGGCAT GTTTGCCGAA CGGTTTGTGA CGGCTAACTC GCTAGTGTAT GATCTGGGGT GTTCTCGTGG TGCAGCCACG TTATCTGCTC GTCGCCATAT CACTCAGCCT AATGTAAAAA TTATCGGCGT GGATAATTCA TTACCGATGG TAGAACGTTG TCGTCAACAT ATTAACGCTT ATCAGAGTGA TATTCCCGTT GAAATTTTGT GTGATGATAT TCGTAATATT AAAATTGAAA ATGCATCAAT GGTTATTTTA AATTTCACAT TACAATTTGT ACCGCAACAA GATCGTCAAT TGTTACTGGA AAAAATATAT CAGGGACTTA ATCCTAACGG AGGATTGGTT TTATCGGAAA AATTTCGTTT TGAAAATAAA AAAATGGACG ACTTGCTTAT TGATTTTCAC CATCAATTCA AGCGAGCCAA TGGTTACAGT GAATTAGAAG TAAGTCAAAA ACGCACCGCA CTTGAGAATG TGATGAGAAC GGATAGTATA GAAACACATA AAGAACGCTT AAAGTCAGCA GGTTTCTCCC AAATAGAACT TTGGTTTCAA TGTTTTAATT TTGGCTCTAT GGTTGCGATA AAATAA
|
Protein sequence | MNKDCIFAAP IEKLGDFTFD ENVAEVFPDM IQRSVPGYSN IITAIGMFAE RFVTANSLVY DLGCSRGAAT LSARRHITQP NVKIIGVDNS LPMVERCRQH INAYQSDIPV EILCDDIRNI KIENASMVIL NFTLQFVPQQ DRQLLLEKIY QGLNPNGGLV LSEKFRFENK KMDDLLIDFH HQFKRANGYS ELEVSQKRTA LENVMRTDSI ETHKERLKSA GFSQIELWFQ CFNFGSMVAI K
|
| |