| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1207 |
|---|
| Symbol | menE |
|---|
| ID | 4240708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1364326 |
|---|
| End bp | 1365732 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638104770 |
|---|
| Product | O-succinylbenzoic acid--CoA ligase |
|---|
| Protein accession | YP_719419 |
|---|
| Protein GI | 113461350 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTT GGCATAAATA TGCACTCACT CCCTTATTTC AATCAAAAAT AGCCTTGCGA
AACTCGCAAG GTGAAGTCTT TACTTGGCAA CAACTTTGTT CTTTAATCAA TCGGCAATCT
CTACTTTTTC AGCAACAAGG TGTTAAAGCA GGTTCGGGCG TGTTGTTATG TGGTAAAAAT
GATTTTTCAT TATTGTTGGC TTATTTGGCA ACTATTCAGT TAGGAGCAAG AGTTTTAGGT
GTTAATCCGA GTTTTCCTGC CGATAAAATT CAGCATATCG CAGAATGTTA TCAATGTGAT
TTTATTTTTA ATAGGACTGC TTTCCTGTTT AAAAATATGC AAAATTTGAC CGCACTTTCT
GTGAGCGACT GTACGCAATA TGTAGATGTT TTACCTGAAA CTGAAGTCAA AATGGATTGT
CAATCGGTGG CAACCTTGAC GTTAACTTCC GGTTCGACCG GTTTACCAAA GGCGGTTGCA
CATAGTTTGC AAGGGCATTT GGATAATGCA CTTGGTGTTT GTGAGTTGAC TCAGTTTAGT
GCAAAAAACA GTTGGCTTTT ATCTTTGCCT TTATTCCATG TTTCCGGACA AGGGATTGTT
TGGCGTTGGT TGGCAAGCGG TGCCGAGTTG CATTTACCGC AAGAGGATTT TTATTATTCC
ATTAGCCAAG CAAGTCATTG TTCATTAGTA CCAACTCAAT TACAACGCTT ATTAGATTAT
TGGCGGCAAA ATCCAACTCT TCCACGTTAC ACACGACATA TTTTGTTAGG CGGTACGCAA
ATTCCCACCT CACTTACCGA TAAGTTAGTT CAATACGGTA TAAAAAGTTA CACCGGCTAC
GGTATGACAG AAATGGCTTC AACGGTTTGT GCAAAATTGA GTGATGGTAA ACGTGGAGTA
GGGCAGCCGT TAGCGGGGCG TGAAGTGCGG TTAGTTTGTG ATGAGATTTG GGTGCGAGGT
GCTGGTCTTG CTTTGGGTTA TTGGCAACAA GGTAAAATTT GTTCTTTACT GAATGGGCAG
GGTTGGTTTG CCACAAAAGA TAAAGGTATT TGGCAAGATA ATGAATTGCA CGTTTTAGGA
CGCTTAGATA ATATGTTTAT TTCAGGCGGA GAAAACATTC AACCTGAGGA AATTGAACAG
ATTATCGGGC AGAATGAAAC AGTTGAACAG GTTTTTGTAT TACCGGTTGA TGATGTTGAA
TTTGGACAAA GACCTGTGGC AATGATTAAA TTTCACGATG TTTTTTCTGA ACAGGCAGTA
CATGAATTAC ATATTTGGTT AGCGGATAAA TTGGAAAAGT TTAAGCAACC TATTCAATAT
TTTCCATTGC TGTTGCAATC ACAAGGAAAT ATCAAAATTT CTCGTCATCA GTTAAAGTCT
GAGCTAACTC GTTTATTAGG AAAGTAA
|
|---|
| Protein sequence | MFFWHKYALT PLFQSKIALR NSQGEVFTWQ QLCSLINRQS LLFQQQGVKA GSGVLLCGKN
DFSLLLAYLA TIQLGARVLG VNPSFPADKI QHIAECYQCD FIFNRTAFLF KNMQNLTALS
VSDCTQYVDV LPETEVKMDC QSVATLTLTS GSTGLPKAVA HSLQGHLDNA LGVCELTQFS
AKNSWLLSLP LFHVSGQGIV WRWLASGAEL HLPQEDFYYS ISQASHCSLV PTQLQRLLDY
WRQNPTLPRY TRHILLGGTQ IPTSLTDKLV QYGIKSYTGY GMTEMASTVC AKLSDGKRGV
GQPLAGREVR LVCDEIWVRG AGLALGYWQQ GKICSLLNGQ GWFATKDKGI WQDNELHVLG
RLDNMFISGG ENIQPEEIEQ IIGQNETVEQ VFVLPVDDVE FGQRPVAMIK FHDVFSEQAV
HELHIWLADK LEKFKQPIQY FPLLLQSQGN IKISRHQLKS ELTRLLGK
|
|---|
| |