Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1198 |
Symbol | |
ID | 4240699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1353283 |
End bp | 1354380 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 638104761 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_719410 |
Protein GI | 113461341 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.347563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA CTCGTCAGCA AATGCGAGCA TTTTTTCAGG AGTTAGGTGA AAAACCTTTT CGAGCAGATC AGTTAGTTAA ATGGATTTAT CATTTTGGTG AAGATAATTT CGATCATATG ACTAACATTA ATAAAAAATT ACGTGAAAAA TTAAAAACTG TTGCTGAAAT TAAAGCTCCG GAAATTGCAG TTGAGCAACG TTCAGCTGAC GGTACGATCA AATGGGCAAT GCAAGTAGGA GATCAGCAGG TAGAAACCGT TTATATTCCC GAAACGGATC GTGCTACGTT ATGTGTATCT TCACAAGTAG GGTGTGCATT AGCTTGTACT TTTTGTTCAA CGGCTCAACA AGGTTTTAAC CGCAATTTAA CTGTATCTGA AATTATTGGA CAGGTTTGGC GAGCTTCAAA AATTATCGGT AATTTCGGTG TTACTGGTGT TCGTCCTATT ACAAATGTGG TCATGATGGG AATGGGAGAG CCATTATTGA ATGTGGCTAA CGTTGTACCA GCAATGGAAA TTATGTTGGA CGATTTTGCT TATGGTTTAT CTAAGCGTCG AGTGACTTTA TCCACTTCCG GTGTTGTTCC GGCACTAGAC AAACTAAGTG AAATGATTGA TGTGGCATTG GCTATTTCTT TGCATGCACC GAATGATGAA TTGCGTAATG AAATCGTGCC TATTAATAAA AAATATAATA TTAAAATGTT GATGGAGAGT GTTAATCGCT ATTTAAATGT TTCAAATGCA AATCACGGTA AGGTAACCAT TGAGTATGTT ATGTTAGATC ATATTAACGA TGGGACTGAA CATGCACATC AATTGGCAGA GGTTTTGAAA AATACACCGT GCAAAATTAA TTTAATTCCT TGGAACCCGT TTCCGGATGC ACCTTATGCT AAAAGCTCAA ATACACGTAT AGATCGTTTT CAAAAAACTT TGATGGAGTA TGGTTTTACA GTTATTTTAC GCAAAACAAG AGGTGATGAT ATTGATGCGG CATGTGGTCA ACTTGCTGGT GATGTGATAG ATAGAACAAA GCGTACGGCA CAGAAAAAAC GGTTTGGAAA AGAAATCGGC ACTCATCAAA TTTATTAA
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Protein sequence | MNLTRQQMRA FFQELGEKPF RADQLVKWIY HFGEDNFDHM TNINKKLREK LKTVAEIKAP EIAVEQRSAD GTIKWAMQVG DQQVETVYIP ETDRATLCVS SQVGCALACT FCSTAQQGFN RNLTVSEIIG QVWRASKIIG NFGVTGVRPI TNVVMMGMGE PLLNVANVVP AMEIMLDDFA YGLSKRRVTL STSGVVPALD KLSEMIDVAL AISLHAPNDE LRNEIVPINK KYNIKMLMES VNRYLNVSNA NHGKVTIEYV MLDHINDGTE HAHQLAEVLK NTPCKINLIP WNPFPDAPYA KSSNTRIDRF QKTLMEYGFT VILRKTRGDD IDAACGQLAG DVIDRTKRTA QKKRFGKEIG THQIY
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