Gene HS_1194 details

Gene Information

• Locus tag: HS_1194
• Symbol: dnaK
• ID: 4240695
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1346950
• End bp: 1348857
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638104757
• Product: molecular chaperone DnaK
• Protein accession: YP_719406
• Protein GI: 113461337
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00921212
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA TTATCGGTAT TGACTTAGGA ACAACGAACT CTTGTGTGGC TGTAATGGAC 
GGCGACAAAC CACGTGTCAT TGAAAACGCT GAAGGCGAAC GCACAACCCC ATCCATTATT 
GCTTATACAA ATGATAATGA AACCTTAGTA GGACAACCAG CGAAACGTCA GGCTGTGACG 
AATCCGAAAA ATACATTATT TGCGATCAAA CGTTTAATTG GTCGTCGCTT TGAAGATCAA 
GAAGTACAAC GTGACGTTGC GATTATGCCT TTTGAAATCA CTAAAGCCGA TAACGGCGAC 
GCTTGGGTAT CGGTAAAAGG TGAAAAAATG GCACCTCCGC AAATTTCAGC TGAAGTGTTG 
AAAAAAATGA AAAAAACTGC GGAAGATTTT TTAGGTGAAA CAGTAACAGA AGCTGTAATC 
ACAGTGCCGG CTTATTTTAA TGACGCACAA CGCCAAGCAA CAAAAGATGC CGGACGTATT 
GCCGGTCTTG AAGTCAAACG TATTATTAAC GAACCGACAG CGGCGGCTCT TGCTTATGGT 
TTAGATAAAG GTAAAGGCAA CCAAACAATT GCCGTTTATG ACTTGGGTGG TGGTACATTT 
GACTTATCTA TTATCGAAAT CGATGAAGTC GGTGGCGAAA AAACGTTTGA AGTTTTAGCA 
ACAAACGGAG ATACTCACCT AGGAGGGGAA GACTTTGACA ACCGTGTAAT TAACTACCTA 
GTTGATGAGT TCAAAAAAGA ACAGGGCGTA GATTTACGTA ACGATCCGCT CGCAATGCAA 
CGTTTAAAAG AAGCCGGTGA AAAAGCAAAA ATTGAGCTTT CTTCCGCTCA ACAAACTGAT 
GTCAATTTAC CTTATATCAC TGCTGATGCT ACCGGACCTA AACATTTAAA CATTAAATTG 
ACTCGTGCGA AATTAGAAGC GTTAGTGGAA GATTTAGTTG CACGTTCAAT GGAACCGGTT 
AAAGTTGCAC TTTCCGATGC AGGTTTAAGC GTTTCCGAAA TCAATGATGT CATTTTGGTG 
GGCGGACAAA CTCGTATGCC GTTAGTACAA CAGAAAGTAG CTGAATTCTT TGGTAAAGAG 
CCTCGCAGAG ACGTTAACCC AGATGAAGCG GTTGCTATTG GTGCAGCTGT ACAAGGCGGT 
GTTTTAGCCG GTGATGTTAA AGATGTTTTA TTGTTAGACG TAACACCATT ATCACTCGGT 
ATTGAAACAA TGGGCGGCGT GATGACAACT TTGATTGAGA AAAATACAAC AATTCCGACG 
AAAAAATCGC AAGTATTTTC AACCGCTGAA GATAATCAAA GTGCGGTGAC TATTCACGTA 
CTTCAAGGGG AACGTAAACA AGCCTCTGCC AATAAGTCTT TAGGTCAATT TAATCTTGAA 
GGTATTAACC CTGCACCACG TGGTATGCCT CAAATTGAAG TAACCTTTGA TATTGATGCA 
GATGGTATTA TCCATGTTTC AGCAAAAGAT AAAGGTACTG GTAAAGAACA AAAAATTACG 
ATTAAAGCAT CTTCAGGTTT AAGTGATGAA GAAATTCAAC AAATGGTTCG TGATGCGGAA 
GCTAATGCGG AAGCGGATCG TAAATTTGAA GAGTTAGTTC AAGCTCGTAA CCAAGCGGAT 
CACTTAGTAC ATAGTACCCG CAAACAATTA GCAGAAGTTG GAGAGAAATT ATCAGCTGAA 
GACAAAGCAC CAATTGAAAG TGCGGTCAAT GAACTTGAAA CTGCGGCAAA AGGTGAAGAT 
AAAACTGAAA TTGATGCCAA AGTACAAGCA TTAATTCAAG TTTCCGAAAA ACTACTTCAA 
GCAAGTCAAC AACAAGCACA AGCTGATGCC GGTGCACAAC AATCTCAAAG TACGAAAGGT 
GGAGATGATG TTGTTGATGC TGAATTTGAA GAAGTAAAAG ATAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVMD GDKPRVIENA EGERTTPSII AYTNDNETLV GQPAKRQAVT 
NPKNTLFAIK RLIGRRFEDQ EVQRDVAIMP FEITKADNGD AWVSVKGEKM APPQISAEVL 
KKMKKTAEDF LGETVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG 
LDKGKGNQTI AVYDLGGGTF DLSIIEIDEV GGEKTFEVLA TNGDTHLGGE DFDNRVINYL 
VDEFKKEQGV DLRNDPLAMQ RLKEAGEKAK IELSSAQQTD VNLPYITADA TGPKHLNIKL 
TRAKLEALVE DLVARSMEPV KVALSDAGLS VSEINDVILV GGQTRMPLVQ QKVAEFFGKE 
PRRDVNPDEA VAIGAAVQGG VLAGDVKDVL LLDVTPLSLG IETMGGVMTT LIEKNTTIPT 
KKSQVFSTAE DNQSAVTIHV LQGERKQASA NKSLGQFNLE GINPAPRGMP QIEVTFDIDA 
DGIIHVSAKD KGTGKEQKIT IKASSGLSDE EIQQMVRDAE ANAEADRKFE ELVQARNQAD 
HLVHSTRKQL AEVGEKLSAE DKAPIESAVN ELETAAKGED KTEIDAKVQA LIQVSEKLLQ 
ASQQQAQADA GAQQSQSTKG GDDVVDAEFE EVKDK