Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1142 |
Symbol | gatC |
ID | 4240643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 1281019 |
End bp | 1282377 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638104705 |
Product | PTS system, galactitol-specific IIC component |
Protein accession | YP_719354 |
Protein GI | 113461285 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCACAG AAATTATGCA ATATATTTTG GATTTAGGCC CAGCGGTAAT GTTACCACTG GTAATTCTCA TTCTCTCGCT AGCCTTAGGT ATGAAATTCG GAGAGTCTTT CAAAGCTGGT TTATCTATCG GTATCGGCTT TGTAGGGATC GGGCTCGTAA TCGGTTTAAT GTTGGACTCT ATTGGTCCTG CAGCAAAGGC AATGGCACAT ACCTTTGATA TTCAGCTAAA TGTTATCGAT CTTGGTTGGC CTGGAGCTTC ACCGATGACT TGGGCTTCAC AAACAGCGTT AATAGCTATT CCTATTGCGA TTGCGGTAAA TATAGCGATG TTGCTGTTAA AAATGACCCG TGTCGTAAAC GTTGATATTT GGAATATCTG GCATATGACG TTTACTGGTG CGTTAGTTCA TATTGCGACA GGTTCGTACT GGTTGGGTAT TCTTGGTGTT ATTGTTCATG CTGCTTTCGT TTATAAACTT GGGGATTGGT TTTCTAAAGA CACCAAACAT TTCTTTGAAT TGGATGGTAT TGCTATTCCG CATGGAACCT CAGCTTACTT AGGACCGGTA GCTGTATTGG TGGATACCAT TATCGAAAAG ATACCAGGGT TAAATAAAAT CCATTTTTCA GCCGATGATC TACAAAAACG CTTTGGTGCT TTAGGCGAAC CTGTAACCGT AGGTTTTATT ATGGGAGTAG TAATTGGGTT ACTTGCTGGC TATTCTATGA AAGACGTGTT GCAATTAGCA GTCAAAACTG CAACAATAAT GCTGTTAATG CCTCGTGTAA TCAAACCAAT CATGGACGGT TTAGCACCTA TTGCCAAACA GGCCCGTAAA AAATTACAAG CACGTTTCGG CGGTAGCGAT TTCTTAATCG GCTTAGATCC TGCATTATTA CTTGGTCACA CCTCCGTAGT ATCTGCAAGT TTAATCTTTA TTCCGCTTAC TATCCTAATT GCTGTGTTCT TACCGGGTAA CCAAGTACTT CCATTTGGTG ATTTGGCAAC TATCGGTTTC TTCGTTGCAA TGGCAGTAGC AGTACACCAA GGTAACTTAT TCCGAACCTT AATTTCCGGT CTGATTATTA TGTCGATGAC CCTTTGGATC GCAACCCAAA CCATTGCGTA TCATACTCAG CTGGCAGCTA ATGCAGGAAC ATTAAAAGCA GGAGAACAAG TCGCTTCAAT GGATCAGGGC GGTTCACCGA TCACTTATTT GATGATTCAG GTGCTGACCT TTGAAAATAT TGTCGGAATG ACTATTATTG CAATCATTTA CTTTTGCGGT GTATTCCTTA CTTGGCGAAG AGCCAAATCC TATGAAAAAG AAATAGTCGC TCAATCAGCA CAAAATTAA
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Protein sequence | MFTEIMQYIL DLGPAVMLPL VILILSLALG MKFGESFKAG LSIGIGFVGI GLVIGLMLDS IGPAAKAMAH TFDIQLNVID LGWPGASPMT WASQTALIAI PIAIAVNIAM LLLKMTRVVN VDIWNIWHMT FTGALVHIAT GSYWLGILGV IVHAAFVYKL GDWFSKDTKH FFELDGIAIP HGTSAYLGPV AVLVDTIIEK IPGLNKIHFS ADDLQKRFGA LGEPVTVGFI MGVVIGLLAG YSMKDVLQLA VKTATIMLLM PRVIKPIMDG LAPIAKQARK KLQARFGGSD FLIGLDPALL LGHTSVVSAS LIFIPLTILI AVFLPGNQVL PFGDLATIGF FVAMAVAVHQ GNLFRTLISG LIIMSMTLWI ATQTIAYHTQ LAANAGTLKA GEQVASMDQG GSPITYLMIQ VLTFENIVGM TIIAIIYFCG VFLTWRRAKS YEKEIVAQSA QN
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